Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3848 |
Symbol | |
ID | 5755663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4531681 |
End bp | 4532385 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641290190 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001556268 |
Protein GI | 160876952 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000966346 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGGTTTG TAAAACCCAA AAGCGTTGAG CAGCAAGATG TGCAACTGCT CCACCGCATG CGCGAACGAT TAACTAAACA ATCAACCGCC TTAATCAATC AAGTCAGAGG GATGTTAGCG GAATACGGCA TTGTGATAAC CAAAAGTAAA TCGGCTTTTA AAGTACAGTT TCCAGATATT TTAGCGGATG AAACCAATGC GCTGACTACC AAAGGTCGGG CCATTTTTTA TCAGTTATAT GAAGAGTTTA GTGATATAGA AAAACGGCTT AAGGGTTGTG ACGTTCAAGT GCTCACTGAA ACTAAGAACA ATGTGATTTG CCAGCGTTTA GAAACTATCC CAGGTATTGG TCCAGTCACC GCTACCGCCT TTTATGCCGC CGCAGGTGAT GGTAAAGATT TCAGTAATGG TAGACACTTT TCAGCTTGGT GTGGCTTGGT TCCCAAGCAA CACAGCTGTG GAGGTAAAGA TAACCTCCTT GGAATAAGCA AGCGGGGAAA TGCTTACTTA CGTACCCTGT TCATCCACGG CGCCAGAGCT GTGTTACAGC ACAGTTGTCA TAAACAGGAT AAATTTAGTT GCTGGGCAAT CCAGTTAGCA GAACGCCGAG GTTTTAACCG AGCCTGTGTA GCCGTCGCCA ATAAACTCGC GAGAATGGCA TGGGTTATCG CGGCGCATGA CGAAGAATAT CGACTTCCAG TATAG
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Protein sequence | MRFVKPKSVE QQDVQLLHRM RERLTKQSTA LINQVRGMLA EYGIVITKSK SAFKVQFPDI LADETNALTT KGRAIFYQLY EEFSDIEKRL KGCDVQVLTE TKNNVICQRL ETIPGIGPVT ATAFYAAAGD GKDFSNGRHF SAWCGLVPKQ HSCGGKDNLL GISKRGNAYL RTLFIHGARA VLQHSCHKQD KFSCWAIQLA ERRGFNRACV AVANKLARMA WVIAAHDEEY RLPV
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