Gene Sbal195_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3842 
Symbol 
ID5755657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4524080 
End bp4524796 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content47% 
IMG OID641290184 
Producttwo-component response regulator 
Protein accessionYP_001556262 
Protein GI160876946 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000808868 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000962447 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAATC CGCACATTCT GATCGTTGAA GATGAAGCCG TTACCCGTAA CACGCTGAGA 
AGTATTTTCG AGGCAGAAGG GTATGTGGTA ACTGAGGCCA ATGATGGCGC AGAAATGCAT
AAGGCTATGC AGGAAAACAA AATTAACTTG GTCGTTATGG ACATTAACTT GCCAGGCAAG
AATGGCCTGT TGTTGGCACG TGAACTACGT GAAATCAACA ACATCGGTCT GATCTTCCTG
ACAGGTCGTG ACAACGAAGT CGACAAAATC CTTGGACTTG AAATTGGCGC GGACGATTAT
ATTACCAAGC CGTTCAACCC ACGTGAATTG ACGATTCGTG CTCGTAACCT TCTGACTCGC
GTCAACAGCG CTGGTGCCGA AGTCGAAGAA AAGAGCTCAG TAGAATACTA TCGCTTCAAC
GATTGGAGCT TAGAGATCAA CAGCCGTTCA TTAGTGAGCC CACAGGGTGA ATCCTACAAA
CTGCCACGTA GCGAATTCCG CGCTATGCTG CACTTTGTTG AAAACCCAGG AAAAATTTTG
ACTCGTGCCG ATCTACTGAT GAAAATGACT GGCCGTGAAC TTAAGCCACA CGATCGTACT
GTAGACGTGA CTATCCGTCG TATCCGCAAG CATTTCGAAA GCTTGCCAGA TACGCCAGAA
ATCATCGCGA CTATTCACGG TGAAGGCTAT CGCTTTTGCG GTAACTTAGA AGGCTAA
 
Protein sequence
MQNPHILIVE DEAVTRNTLR SIFEAEGYVV TEANDGAEMH KAMQENKINL VVMDINLPGK 
NGLLLARELR EINNIGLIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR
VNSAGAEVEE KSSVEYYRFN DWSLEINSRS LVSPQGESYK LPRSEFRAML HFVENPGKIL
TRADLLMKMT GRELKPHDRT VDVTIRRIRK HFESLPDTPE IIATIHGEGY RFCGNLEG