Gene Sbal195_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3839 
Symbol 
ID5755654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4520153 
End bp4521274 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content49% 
IMG OID641290181 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_001556259 
Protein GI160876943 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000638255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCCGA CAAGATCGTC CCTGCAAATT GGGGAGCTTG CCGCAGGGCA AGCGCTCACC 
TTGCCTATTT ACCATTTTAA GCCCAGCGAC GATAAGGCGA CTGGCCCCAA AGTGTATATT
CAGGCCAATG TCCACGGCGC TGAAGTGCAA GGTAATGCGG TGATTTATCA GTTGATGAAG
CAGCTTGAAC ACTGTGACAT CCGCGGCGAA ATCACCTTAG TGCCATTAGC CAATCCTCTT
GGGATCAACC AAAAAAGTGG TGAGTTTACC CTCGGCCGAT TTGACCCTAT TACGGGGGCG
AACTGGAATC GTGAGTATTT GAATCATGCT ATCGATTTGC CGACTTGGTA TAGCGAACAT
GCCAAGCTCA GTGATAACGA GCTGATCCAA GCCTATCGCA GTACTTTGGT TGAAGCCTGT
CAGCAAAAAT TACGGCATGA ATGGGGCATT ACAACCGGCC ATAGGCTTGC GGTCAACTTG
CAGATAATGG CCCATGGCGC GGATATAGTG CTCGATCTGC ATACGGGGCC TAAATCCTGT
AAGCATTTGT ATTGTCCTGA ATATGACTTA GCTGCCGCGC AGTTTTTGTC GATCCCTTAT
ACGCTCGTTA TCCCCAATAC TTTTGGTGGT GCTATGGATG AGGCAGCGTT TTGTCCTTGG
TGGCAATTAA GTAATTTTGC AAAAGCGCAG GGGCGTGATT TAGCCGTTGC TGTGTCAGCG
TTAACCTTGG AGTTGGCGAG CCAAGAGCGC GTCTGTCTTG AGGATGCGTT GGTTGATGCC
CAAGGGATTT TGGCATATTT AAGCCACAGA GGCGTAATAG CTGAAACCGT TGCGCCCGCT
AAAATGCCGC GCTTTGGTTG TTACCTTAAA GACTATAAAA AATATCACGC GCCGAGTTCA
GGGTTAGTGG AATACCTCGC ACCTGTGGGT GAACCACTGG CTGCGGGGCA GCCCTTAGTT
AATTTACTGC GAATGGATTT ATACGGTACG GCAGATGAGC TAAAGACGGT CTGTTTGCCC
CAGGACTGTG TGCCTATTTT GCACTTTGCT TCGGCGTCTG TGCACCAAGG GACTGAGCTT
TATAAAGTCA TGACTCATGT GTTTGAGTTG CCGACGATAT AA
 
Protein sequence
MPPTRSSLQI GELAAGQALT LPIYHFKPSD DKATGPKVYI QANVHGAEVQ GNAVIYQLMK 
QLEHCDIRGE ITLVPLANPL GINQKSGEFT LGRFDPITGA NWNREYLNHA IDLPTWYSEH
AKLSDNELIQ AYRSTLVEAC QQKLRHEWGI TTGHRLAVNL QIMAHGADIV LDLHTGPKSC
KHLYCPEYDL AAAQFLSIPY TLVIPNTFGG AMDEAAFCPW WQLSNFAKAQ GRDLAVAVSA
LTLELASQER VCLEDALVDA QGILAYLSHR GVIAETVAPA KMPRFGCYLK DYKKYHAPSS
GLVEYLAPVG EPLAAGQPLV NLLRMDLYGT ADELKTVCLP QDCVPILHFA SASVHQGTEL
YKVMTHVFEL PTI