| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3760 |
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| Symbol | |
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| ID | 5755574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4428517 |
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| End bp | 4430535 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641290101 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001556180 |
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| Protein GI | 160876864 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000134853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATT GCGATACATC TATATTCAAA ATGAACAAAC AAGTTATGCT AAGCTCACTA
TTAGCTATTG ATTTTAATGT GAACAGGATA CCTTTTTTGC TACGTCCATT CCGATACTTA
TCATTTACCT TGTTGCTGCT CTTACTGCTG CTCAGCCTCG CTATGGCAGA AGAAAAGACT
CAGGTTGATA AAATATTTGA AAGACTTGAA AGCGGTGAGC CCATGACCCG CGAAGCAATT
AACAACGATC TTGCATTATT GAGCAAACTG ATTGCAACCG ACGATGTACT CCGCAATGAA
AAGCTACAGC TACTAAAATG CTGGGAGCAA AGTGCCGAAA CGGATACAGA CATAGCACAG
GCAGTTAAGA ATACGAGTCA AACACTCACC CTTATTCCAC CAACGGCTTC CGCGCATTTC
ATCACCGACC TCATGCTTTG TCATTCTTGG TTTTTGCAGT TAAATGGTGA TGTAGATAGC
GCAATGGAAG GCTATAACCT CAGCGTTAAG CGTGCCTATG AGCATGAGGA TCTTAAACTC
ATTGCCGACT CACGCAGCCT TCGCGGCGCT CTGTATTCCT ATATTGGCGA TTTTTCTGCG
GCATTAGACG ATCTGATAAC TGCACAAGAT CTCTACGAGT CACTGAATTT AACCGGCTGG
GCTAACATCA ATCTTGCCGA TATGGCCACC AGCTTTAGAC GTTATGGCGA TCCCCAAAGT
GCAATCCGTT ACTACAATAA ACTCAAAGCA CTCTATTTAA AGAACAATAA CCAAGAGCAG
GCAATGTATG TCACCTCAGA AATAGGTCTG GCTTTAGATG AACTGGGTGA ACATCAACAA
GCTATTGATC ACTTCTTGCT CAGCTATCAA TACTTTAAGG AACATCAGCT AGAAAAAGTG
GCCGCCACTA TGGCGACGGA CATTGCCTTT AGCTTAATCA AACTCCATCG TCTTAATGAA
GCGGAAAAAT ATTTAACTGA AGCCGCAGCT GTGATTAGCG AAAAAGATTA TGCCGCTTAT
AGCTTTATGA AACTCTTTAC GGCCAATATC AAGTTTCAAC AAGCACGTTA TAAAGAAGCG
CTTACTGAAC TCGAACAGGG GGAAAAAGCC TTTCGAACTC TGCAAAATGA TCGGGGACTC
ACCCAACTAT TACAGCTGAA AAGTGATGTC TATGCGGCGA TGAATAATTT ACCTGCGGCC
TATGGCGCAC TGCAGGAATT TGTCGCCCTC ACCAAAAAAG TCGATGACAA CTCCTTCTCT
CATCAAACCA CAGAATTAAA AATGAAGTTT GATACCACTA GGATTGAATC TGAAAATCAG
CGCTTGATTG AAAACCAAAG CCTTAAAGAA CAAGAACTCG CGCTGCTTGA GAAGAATAAG
TCATTGCAAC ACATCATTTT ATTATTGACG GGCTTTATCC TAACAATAGT GTCGATATTT
GCGTATAAAC AAGTGCAGAG AAATCGCCAA TTACAGGTCA TAGCCCTCAC CGATTACCTC
ACCAAGCTCC CTAATCGTCG GCATATTTAT GCCCAAGCCG CGCAGTATTT TCAGCAAGCC
TTAAAACAAC AAAGCCCTTT TTCGGTGATT ATCTTTGATG CGGACCACTT CAAGAAAATT
AACGATAACT TCGGCCATGA ACTGGGCGAT CGCGCCTTAC TGACGATCGC AAGCGCAAGT
CAAGCCCTAA CGGGTAATAA AGATCTTATT GGCCGTATCG GTGGTGAAGA GTTTTTAATT
CTCTTACCCA ACACAGATGC TGAACGTGCT TGTGAACTTG CCCATCAGTT GCAAGCTCAT
ATTAGCCGCC TAGGCGCAGA GGATTTACCC GCTGAACTCA AATTGACTGT TAGCGCAGGA
GTCGCAACCT TAGCGCCACA AAAAAAGACT GAAAATACCT ATCAAGACAA AGACTTTGCC
AGCCTACTGA AACGTGCCGA CGACGCCCTT TATGAGGCTA AAAATGCGGG AAGGAATTGT
GTTAAAGCTG CCAGAAATGA AGCTGTGAGC GAGAGTTAA
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| Protein sequence | MQNCDTSIFK MNKQVMLSSL LAIDFNVNRI PFLLRPFRYL SFTLLLLLLL LSLAMAEEKT
QVDKIFERLE SGEPMTREAI NNDLALLSKL IATDDVLRNE KLQLLKCWEQ SAETDTDIAQ
AVKNTSQTLT LIPPTASAHF ITDLMLCHSW FLQLNGDVDS AMEGYNLSVK RAYEHEDLKL
IADSRSLRGA LYSYIGDFSA ALDDLITAQD LYESLNLTGW ANINLADMAT SFRRYGDPQS
AIRYYNKLKA LYLKNNNQEQ AMYVTSEIGL ALDELGEHQQ AIDHFLLSYQ YFKEHQLEKV
AATMATDIAF SLIKLHRLNE AEKYLTEAAA VISEKDYAAY SFMKLFTANI KFQQARYKEA
LTELEQGEKA FRTLQNDRGL TQLLQLKSDV YAAMNNLPAA YGALQEFVAL TKKVDDNSFS
HQTTELKMKF DTTRIESENQ RLIENQSLKE QELALLEKNK SLQHIILLLT GFILTIVSIF
AYKQVQRNRQ LQVIALTDYL TKLPNRRHIY AQAAQYFQQA LKQQSPFSVI IFDADHFKKI
NDNFGHELGD RALLTIASAS QALTGNKDLI GRIGGEEFLI LLPNTDAERA CELAHQLQAH
ISRLGAEDLP AELKLTVSAG VATLAPQKKT ENTYQDKDFA SLLKRADDAL YEAKNAGRNC
VKAARNEAVS ES
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