Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3739 |
Symbol | |
ID | 5755553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4405965 |
End bp | 4406609 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641290080 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001556159 |
Protein GI | 160876843 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.137488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.709521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATT TGAAGCGCCT CACAAAAACC ATTTTCTCTT GTTTTACCTT AAGCGCCCTA CTCTTGCTGG CGGGGTGTGA AACCTTGCCG CCGATGACTG ACCTAAGCCC AATCACAGTC ACGGATGCGC GCCAAGCAAC CGCTTGGGAA TTACAGGGTA AACTGGCGAT AAAAACCCCT GACGATAAGC TCAGCGCTAA TATCTACTGG CGCCACAGTG AAGATCGCGA CGAACTGACA CTCACCACTA TGCTAGGTAC GACTGTGTTG ACGCTTAACT CAACCCCGAA CTCGGCCCAT TTGCATATCG ATGGCAAAGA CTTTCGCGAC GATAATGCCC AACGTTTACT CGAGCGTGTC AGCGGTTGGT CCATCCCCTT GGCCGATTTA CCTTTGTGGA TCACTGGCCA AGTTGGCCCC AATGATCAGG TCATCGTACG CGATAGCCAA GGCAAACCTA AACAGCTAAC CAATACTCAA ACCCCGCCAC CTTGGCAGGT CGCATTTTTA AGTTGGCAAT CCCAGAGCGG CGCCAGTGTG CCCCATCAAT TAAAGCTTGA ACGTAGTGAT TTAGAACTCA AACTACAACT GAATCAATGG CAAGCTCTTG GCAAGCCCGC GATCTTAGTC GGAGAACAAC CTTAA
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Protein sequence | MNNLKRLTKT IFSCFTLSAL LLLAGCETLP PMTDLSPITV TDARQATAWE LQGKLAIKTP DDKLSANIYW RHSEDRDELT LTTMLGTTVL TLNSTPNSAH LHIDGKDFRD DNAQRLLERV SGWSIPLADL PLWITGQVGP NDQVIVRDSQ GKPKQLTNTQ TPPPWQVAFL SWQSQSGASV PHQLKLERSD LELKLQLNQW QALGKPAILV GEQP
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