| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3717 |
|---|
| Symbol | |
|---|
| ID | 5755531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4385038 |
|---|
| End bp | 4385904 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641290058 |
|---|
| Product | sterol desaturase family protein |
|---|
| Protein accession | YP_001556137 |
|---|
| Protein GI | 160876821 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG CCTCGCTGAT CCAGCACCCC GAAGTGTTAC TGCTCGTGCT CGCGCCGTTG
TTTTTCGTGT GTATTTTGCT GGAATGGTAT TTTGGCGATA AAAGACAAAA GCTACCGTTA
ACTGCACGCT ATCGCGGCCA AGAAGTGCTG TGTAATTTCA GCCTCGCGGC CATGCATCAA
GGCGCCGATC TACTCACTGG CTTGTTGATC GCTAAGCTGT ATCTGGCGAT GTTTGGTTGG
AAGTTATTCG ATATTGAAAT GGGCCCATTA AGCTTTATTG CTTTGATGAT CGCGCAGGAC
TTTTGTTATT ACTGGTTCCA CAGGGCGAGC CATAGAGTGC GCTGGATGTG GGCGGCTCAC
GTGGTGCACC ATAGCTCTGA GAATATGAAT TTTAGCACGG CGTTTCGCCA GAGTTTAATG
TATCCGTTTG CGGGCATGTG GGTGTTTTGG TTGCCGCTGG TGGTCATAGG TTTCGAACCA
AACTGGGTGG TATTTGTGGT ATTACTCAAT CTGGGATTGC AATTTTTTGT GCATACCCAA
GCGATTAAAT CACTCGGACC GCTGGAATGG GTATTCAACA CACCGTCACA CCACAGGGTG
CATCACGGTC GTAATCCCCA ATATATCGAT AAAAACTATG CGGGCGTGCT GATTATTTGG
GACAAGCTGT TTGGCACTTT TGAGCCCGAG GTAGAGACTG TTATTTACGG TATCACTAAG
CCTGTAAATA GTTTTAATCC CCTTAAAGTG ACGTTTAGCG AATGGCGAGA CATGTTTGCT
GAGGTCACCG CGACAGGCTT GAGTGTTAAA CAACGACTAC ATATCTTGTT TGCTCCGCCT
TCCAGCAGTT TAAAAAGCGA GGAATAA
|
|---|
| Protein sequence | MDIASLIQHP EVLLLVLAPL FFVCILLEWY FGDKRQKLPL TARYRGQEVL CNFSLAAMHQ
GADLLTGLLI AKLYLAMFGW KLFDIEMGPL SFIALMIAQD FCYYWFHRAS HRVRWMWAAH
VVHHSSENMN FSTAFRQSLM YPFAGMWVFW LPLVVIGFEP NWVVFVVLLN LGLQFFVHTQ
AIKSLGPLEW VFNTPSHHRV HHGRNPQYID KNYAGVLIIW DKLFGTFEPE VETVIYGITK
PVNSFNPLKV TFSEWRDMFA EVTATGLSVK QRLHILFAPP SSSLKSEE
|
|---|
| |