Gene Sbal195_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3711 
Symbol 
ID5755525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4379545 
End bp4380315 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID641290052 
ProductABC-2 type transporter 
Protein accessionYP_001556131 
Protein GI160876815 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC TCTACTTTAT CGCCTTTAAA AGCATCTTAA GCAAAGAAAT TAATCGGTTT 
ACGCGAATTT GGATCCAGAC TTTAGTGCCG CCTGCGATTA CCATGACCTT GTATTTCTTG
ATCTTTGGTA ACTTAGTCGG CAGCCGAATT GGAGAGATGG GCGGCGTATC TTATATGGAG
TTTATCGCCC CAGGTTTGAT CATGATGTCG GTGATCACTA ACTCTTACTC GAACGTGGCG
AGCTCATTCT ACAGTGCTAA GTTTCAACGC AATTTAGAAG AGCTGATGGT GGCTCCTGTG
CCCCATTATG TGTTGATTGC TGGCTATGTT GGTGGCGGCG TGGCGCGCGG TTTATGTGTC
GGCCTAATAG TGACGCTTGT GGCCATGTTC TTCGTCGACA TTAGCTTGCA TCATGCCGGT
TTAGTGGTAA TGACAGTGTT TTTAACCTCA GTGTTATTCT CACTGGGTGG CTTGATTAAC
GCTGTTTTTG CAAAGAGTTT TGATGATATC AGTATCATCC CGACCTTTGT GCTCACCCCA
TTAACTTACC TTGGCGGGGT ATTTTATTCC CTGTCACTCT TGCCCCCTTT CTGGCAAGGC
GTGTCGGCAC TCAACCCTGT GGTCTATATG ATCAACGTGT TCCGCTATGG CTTTTTAGGC
TTCGCCGACA TCAGTGTGCC ATTGTCCATC GCCATTATGA TCGGTTTCTG TGTCGCTCTG
TGGACCTTAG CGTATTACTT AGTCTCGCGC GGAATAGGGT TACGTTCGTA A
 
Protein sequence
MNQLYFIAFK SILSKEINRF TRIWIQTLVP PAITMTLYFL IFGNLVGSRI GEMGGVSYME 
FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVLIAGYV GGGVARGLCV
GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP
LTYLGGVFYS LSLLPPFWQG VSALNPVVYM INVFRYGFLG FADISVPLSI AIMIGFCVAL
WTLAYYLVSR GIGLRS