| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3708 |
|---|
| Symbol | |
|---|
| ID | 5755522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4374538 |
|---|
| End bp | 4378176 |
|---|
| Gene Length | 3639 bp |
|---|
| Protein Length | 1212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641290049 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001556128 |
|---|
| Protein GI | 160876812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.342982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGACAA AACTATCGAT CGCGATCTCC GCTGCACTAC TATCAAGCGC AGCTATTGCT
GGCACTGCAA CCCAGTACAA CACTACTAAC CAAACAGCAG ATCAGTATGC GGGACTCAGT
GTTACAAAGA ATGAAAGTAA TGAGCAAAAA CAAGCTGTTG CTTGGATGAT AAGACTTAAA
GCTCCTTCTG TTGCTCAACA GAGCCAATTA AAAGGCTTTA ATCGTCAATC AGTAATGAGC
AATATCGAAA GTTCACAATC AAAAGTTAAA AATGCTATTC AGAGCATGGA TGCCGATATT
AAGATTGTCG CAACCACCTC AAAATTGGTT AACTCCATTG TTGTTCAAGG TGATCATAAA
AAACTCACTA CTTTACTGAA AAATGCTGAA GTTGCAGATA TTTTACCTAT CTATGACTAT
AAACTCGATG TTGAAGCGAG TGCTGAGTAC ATCAAAGCAA AAGCCGTTAT CGAAGCAGGT
GTAGCATCAG GCAAAGGTCA GCGTGTTGCA ATTCTTGATA CGGGTGTTGA TTACACCCAT
AAGGCTCTTG GTGGTTCAGG TTTAATTGCA GACTATCAAG CCGCAGTTGC AGCAAAAAGT
GAAATGCCAA ACTGGCCACA GGGTAAAGTG ATTGGTGGTT GGGACTTTGT AAATAACGAC
CCGAACCCTA TTGATGTTAC AACTAACCAC GGTACTCATG TTAGTCACTC AGTCGTTGGT
ACAGCACCAG ATGTAGAGTT ACTCGTCTAT TCAGTGTGTA ATTCAGGCTG CTCGGGTATT
GCACAGCTTA ATGCACTAGA AGCCGCTATG GACCCTAATG GTGATGGCGA TATCAGTGAC
CGAGTTGATA GCGTAAACAT GTCTTTAGGG GGGGATTTTG GCGATACTGA CGGTGGTGCA
GTTCAAGTAT TGATCGATGA AATGGTTCAA CTTGGCGTAA ACTTAGTCAT TTCTGCTGGT
AATGATGGCC CAACACCTTT TGTTGTTGGC GGTCCAAGTA CTACCAATAG TGCCTTATCA
GTAGGGGCTA TGACGCATCC AACAACTAAA GTTGGAAAAG TTGATGCAAT GCTCGTTGGT
GAATCAATTA CTGCAATTGG TGCCGGATTT AATAAATCAA ATACATACAG TTTCACGAAC
ACAACTGCTC CAATAGTTTA TCCTTCAACT AACCAAAATG GTTGCGTTGC TTACACAGAA
GATTTTACTG GTAAAACGGT ACTCATTGAT CGTGGAGTTT GCGGGTTCGC CGTTAAGGTT
CTAAATGCAC AATTAAAAGG TGCTGCATTC GTCATAGTGG CAAACAATGC CGCCAATGCT
GGTGCTATTG TGATGGGAGG AGCGGACGAT AAGATCACCA TTCCATCGGT CATGATTTCA
AAAGAAGATG GTGATGCGAT CAAAGCAGCA CTAGAATCAG GTGACGTACC TTTCAGCATT
TCATCAACTG AAGTAACTAC AGCTGGAGCA ATTGCAACCT TTACTTCACG TGGACCTTCA
ATTGCAGGCA CTTTAAAGCC AGAGATCACC GCTCCTGGTA CTGACATATT AACTGCTCAC
CCAGGTTTAG GAGAAGGATT AACCCCAATT AGCGGAACGT CTTTCTCTAG TCCAATAACA
GCTGGTGCAA TTAGTATCAT TCGTGAGGCG TTACCAAATC GCAACGCGTT TGAAATTAAA
GCCACAATTA TGAACGCGGC AAACTTAGAC GTAACGCTTG AGCCAAAAGA AATCAATCCA
GACACTGAGC TAGCACCAAT CAGTTATATT GGTTCAGGAT TAGTGAATGT TGAGAAAGCC
GTTAATCTTC CTGTCGCCGC TTGGAATAAA GAGACTAAAC AAGCCGCTTT AGCATTTGGT
TTATTGGCTC TAAACAAAAC AACTTCAATT ACTAAAACTG TTTCTGTTAA GAACTTCTCG
ACTGCAGAGA AAACCTACAC ACTAAAAGTC GACCAGCGCT TCCAGAATGA CTTAGATTCT
GGTGCGCTAA GTTTTGCAGT ACCTGCAAGC GTAACGATTC CAGCAGGGCA AACTGTCGAC
TTTGACGTTA CAGCAACCAT TGACCCAACA AAACTGCCAG AATGGACTCT GACATCATCC
TATGAGCTTG ATGGGACTGC TGCTGACGCA TCTACTGCAT TAACATTGTC AGAATACGAT
GGTGCAATCC AATTTATGGA TGGCGAAGAC AAAGCGCTAC ATTTGGTTTA TCACATTCTA
CCAAAAGCAG CTGCAGCAAT TTCAGTTGCA ACCGAAGTCA CAGCAGATGG TTTAGTACGG
ACACTAACTA ACGTAGGTGC CACTTCAATT ACCGATCCAT TTACGGCTCC ACTCATTGCC
ACTAGCCCTG TTGATTCATC AAGACGTCAC GACCTGCTGA ATGCATCGAG TGAACTGTTG
TTAAGCAGCT CATGTGATGC AGGTATTGCG ATATATAACA CGCTGCAAAT GCGCGATCCT
ATTATCCATC CTTTAGCGGG TAACTATTCA GTCGATTATG ATCTCAACAA TGATGGTGTT
TGGGATTACA CGGCAGCATC GGCGAACTTA AACTGGTTCA ATGATGCATA TCCAAGATCT
ATCTATGGTT TAGTTTCTAA ATATGGTACT TCGTCTGGAA CATTAGAACC TGTATTCCAC
GTGACTGGTA ATGACTTCCT AACGAGTAAA GCCTGTTTTG AAGATTTAGG CTTAACTCAA
GCGGATTTAG GTAAGACTAT CAAGGTTCGC TTCCGTGTCG AAGACAGTGA CTGGGCTCCA
ATTCCATCGG GTGATGAAGA CAGCGTAGTA GCAACACTTA TGCTTGATGG CTCAGGAACC
TCTGCAATGC TAGTTGATGC AGAAGGCAAT GAAGTCACTG AACTAAAACC GGGAGAAAGT
GCAACTTTAG AAGCTCAAGT TGGCGATAAT GCGATGGGCT TTATGTTCTT GTCTGATTCA
GGCTCAATGT CTGTTGTTGC TAATACGTCA GATGAAGGTA ACTCTGCTCC AACAGTAGCC
AACGTGACGC TTTCAGTAAA CAAAGGAGCT GCAGCTGGAA GTGTGTTAGG CAAATTAACT
GCAACAGACC CTGACATGAT CACAAGTCCA TTCTCCGAGT TTGTCACTCT GAACTCTAAC
AGCAGCATGG TTGCTGTCGA TAAGGATGGT ACTGTACATT TAAGTGCTGA CGCAGTCATT
AATCAACAAA GCAAAACGAT GGAAGTAGAA GTTATCGCGC TAGACACTAT GGGCAACGCT
TCGGCGCCAG CTAAAGTTAC TATCATGATT AATAATACTA AGCCTACCGT TTCACCTAGC
AGTGCAACTG CAACAGAAAA CTCGTATGTT GCATTACTCG CTAATGGCAA AGATGCTGAC
AAAGATACAT TAACATACAC TTGGACGCAG ACATCAGGTC CAGCAGTGAG CTTTGTTAAT
GGCTCAGAAA AAATTGGCTT TACGGCACCC GCTGGTGATA ATGTTTATAC ATTCACAGTT
GTTGCTTCTG ATGGTGTAGA TAGCAGTAAT GCTGGAACTT CAACTGTAAC AGTGAAAGCT
AGTGCTTCAA CTAGTTCTGG TGGTTCTGGT GGCGGTGCTC TAGGTTGGTT AACAGCCTTG
TTGTTACCTC TGGCGGCAAT GCGTCGTCGT ATGAAGTAA
|
|---|
| Protein sequence | MKTKLSIAIS AALLSSAAIA GTATQYNTTN QTADQYAGLS VTKNESNEQK QAVAWMIRLK
APSVAQQSQL KGFNRQSVMS NIESSQSKVK NAIQSMDADI KIVATTSKLV NSIVVQGDHK
KLTTLLKNAE VADILPIYDY KLDVEASAEY IKAKAVIEAG VASGKGQRVA ILDTGVDYTH
KALGGSGLIA DYQAAVAAKS EMPNWPQGKV IGGWDFVNND PNPIDVTTNH GTHVSHSVVG
TAPDVELLVY SVCNSGCSGI AQLNALEAAM DPNGDGDISD RVDSVNMSLG GDFGDTDGGA
VQVLIDEMVQ LGVNLVISAG NDGPTPFVVG GPSTTNSALS VGAMTHPTTK VGKVDAMLVG
ESITAIGAGF NKSNTYSFTN TTAPIVYPST NQNGCVAYTE DFTGKTVLID RGVCGFAVKV
LNAQLKGAAF VIVANNAANA GAIVMGGADD KITIPSVMIS KEDGDAIKAA LESGDVPFSI
SSTEVTTAGA IATFTSRGPS IAGTLKPEIT APGTDILTAH PGLGEGLTPI SGTSFSSPIT
AGAISIIREA LPNRNAFEIK ATIMNAANLD VTLEPKEINP DTELAPISYI GSGLVNVEKA
VNLPVAAWNK ETKQAALAFG LLALNKTTSI TKTVSVKNFS TAEKTYTLKV DQRFQNDLDS
GALSFAVPAS VTIPAGQTVD FDVTATIDPT KLPEWTLTSS YELDGTAADA STALTLSEYD
GAIQFMDGED KALHLVYHIL PKAAAAISVA TEVTADGLVR TLTNVGATSI TDPFTAPLIA
TSPVDSSRRH DLLNASSELL LSSSCDAGIA IYNTLQMRDP IIHPLAGNYS VDYDLNNDGV
WDYTAASANL NWFNDAYPRS IYGLVSKYGT SSGTLEPVFH VTGNDFLTSK ACFEDLGLTQ
ADLGKTIKVR FRVEDSDWAP IPSGDEDSVV ATLMLDGSGT SAMLVDAEGN EVTELKPGES
ATLEAQVGDN AMGFMFLSDS GSMSVVANTS DEGNSAPTVA NVTLSVNKGA AAGSVLGKLT
ATDPDMITSP FSEFVTLNSN SSMVAVDKDG TVHLSADAVI NQQSKTMEVE VIALDTMGNA
SAPAKVTIMI NNTKPTVSPS SATATENSYV ALLANGKDAD KDTLTYTWTQ TSGPAVSFVN
GSEKIGFTAP AGDNVYTFTV VASDGVDSSN AGTSTVTVKA SASTSSGGSG GGALGWLTAL
LLPLAAMRRR MK
|
|---|
| |