Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3706 |
Symbol | |
ID | 5755520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4373098 |
End bp | 4373775 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641290047 |
Product | pseudouridine synthase |
Protein accession | YP_001556126 |
Protein GI | 160876810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.143352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT TTATTTACCA ACCACCGACA ACTCCTTGGC TCGATATTCT TTATCAAGAT AAAGACATTA TCGTCATCAA CAAACCTTCG GGATTGTTGT CTGTGCCCGG TCGCGATCCT GCCCATTACG ACAGTGTCTA TGCTCGGGTA AAAGCTGAAC ATCCCCATAG CCAAATCGTC CACCGCCTCG ATATGGCGAC CTCAGGCGTA ATCGTTGTCG CCCTTATTCG TAGCGCTGAA CGTGAATTAA AACGTCAATT CCACGATAGA GAAACCAGCA AGACCTACTT TGCAAGGGTC GCTGGCCATG TCAAAAATGA TACGGGTAGT GTTGATTATC CGCTGATCTG CGACTGGCCG AATCGCCCAA AACAGAAAGT CGATCATCTT GTGGGCAAAC CGTCTTTGAC TCACTACCAA GTAATAAGTC GTGCCAAACG CTCGACGCTG GTGAAACTCA CGCCAATCAC TGGCCGCTCA CACCAATTGC GCGTGCATAT GATGGCGCTG GGCCATCCAA TCTTAGGTGA TGGTTTTTAC GCCGATCCAC TGGCCAAATC CTTAGCGCCT CGCCTATTAC TGCATGCGGC AGAGCTCACC ATCAAACATC CCTACACGGG TGTCAGTATG ACTTTCAGTG CAGAAGCGCC TTTTTGTGAG CCTTTGGGCG AACAATGA
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Protein sequence | MTDFIYQPPT TPWLDILYQD KDIIVINKPS GLLSVPGRDP AHYDSVYARV KAEHPHSQIV HRLDMATSGV IVVALIRSAE RELKRQFHDR ETSKTYFARV AGHVKNDTGS VDYPLICDWP NRPKQKVDHL VGKPSLTHYQ VISRAKRSTL VKLTPITGRS HQLRVHMMAL GHPILGDGFY ADPLAKSLAP RLLLHAAELT IKHPYTGVSM TFSAEAPFCE PLGEQ
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