Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3647 |
Symbol | |
ID | 5755461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4299945 |
End bp | 4301156 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289990 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001556069 |
Protein GI | 160876753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA CTCTACTGAG GAGAACATCT CCTTTATTAA TTTTGCTGCT ATTTGGCTTA GGCGCAAAAA TATTAATGCA AACCAAGGAA GCGCCAGAAC AAAAACCTGA AGAGATGCCC ATTCCTATCG TTGATGTAAC GCAAGTGACT CAGCAAACGG TATCGCTAAA CTTACCTTCC TACGGTGTGG TTAACCCAAA ATATAAAACC CAACTGGTGA CCGAAGTTCA AGGCAGAATG CTGACCATTT CCCCTAATTT TGTGGCGGGC GGCATAGTTA AGAAAGGCGA ACAACTCGCG CAGATCGAGC CCTCAGATTA CGAGGCTGAT TTAATGCAAG CCGAAGCGAC GCTGGCCCAA GCTACCGCAG CGCTGAACGA AGAAATTGCC CGCGGTGAAG TCGCTAAAAT CGAATTCAAA GGCTACGACA AGGGCTTACC CCCAGAGTTA GGTCTGCGTA TTCCACAGCT TAAAAAAGAG CAAGCCAACG TTAAATATGC GCAAGCAGCA CTGGCGCGTG CCCAACGTAA CCTTGAGCGC ACGGTTATCC GCGCCCCCTT TGATGGCATA ATCAAAGCGC GCAATGTCGA TTTAGGTCAG TATGTTAGCT TAGGTACAAA TCTAGGAGAA CTCTACGACA CTAGTGTTGC TGAAATCCGC TTACCGATTT CCAATGACGA TCTAGCCTAT CTAGAGTCGG TCGATAATCC CGATACCCTA GTGACGCTGA GCGCCTCTTT GGCGGGTAAA GAAAATACTT GGGATGGCAA TATTATCCGC AGCGAAGGCG TGATCGATGC TGAAAATCGC ATGGTGTATT TAGTCGCTGA AATCAAAGAC CCTTACCTGC GCGCCAATAA AGTTGCTGGC AGCTTACCGC TTAAATATGG CAGCTTCGTC AATGCAGTCA TCAAAGGTCG CACCGTCGAT GGCATAGTAA AACTGCCCCG CCATGTGGTT CGTAACGATC ACGTCGCCTT AGTTAACGAC AAAAATATTG TTGAAATGCG CCATGTGAAT ATCGTTCGTA GCGATCTCGA CAATGTGTAT ATCAAGGACA GTCTAAAAAC GGGCGAGCGC GTCGCCACCA CTCACTTCAA CAGCATGGCA AACGGTCAAC TGGTCAAGGT CTTAGGTGAA GCGGCATTGC CGACTAAGAC GCCAAAAGAA GACACGCCTG AGTCGAGTCT TGCGGCCACT GGAGTGAAAT AA
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Protein sequence | MMKTLLRRTS PLLILLLFGL GAKILMQTKE APEQKPEEMP IPIVDVTQVT QQTVSLNLPS YGVVNPKYKT QLVTEVQGRM LTISPNFVAG GIVKKGEQLA QIEPSDYEAD LMQAEATLAQ ATAALNEEIA RGEVAKIEFK GYDKGLPPEL GLRIPQLKKE QANVKYAQAA LARAQRNLER TVIRAPFDGI IKARNVDLGQ YVSLGTNLGE LYDTSVAEIR LPISNDDLAY LESVDNPDTL VTLSASLAGK ENTWDGNIIR SEGVIDAENR MVYLVAEIKD PYLRANKVAG SLPLKYGSFV NAVIKGRTVD GIVKLPRHVV RNDHVALVND KNIVEMRHVN IVRSDLDNVY IKDSLKTGER VATTHFNSMA NGQLVKVLGE AALPTKTPKE DTPESSLAAT GVK
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