Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3628 |
Symbol | |
ID | 5755442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4275470 |
End bp | 4277260 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641289971 |
Product | flavocytochrome c |
Protein accession | YP_001556050 |
Protein GI | 160876734 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACAA GAAAGATTCA AAAAACAGCA CTAGCCATGC TGATCTCTGG CGCAATGGCA GGAACTGCCT ATGCTGCACC AGAAGTGCTA GCCGATTTTC ACGGTGAAAT GGGCAGTTGC GACAGCTGCC ACGTCTCAGA CAAAGGTGGC GTCAGTGATG ACAACCTTAG CCATGAAAAT GCCCAATGCG TTAGCTGCCA CGGCGATTTA AAAGAACTGG CCGCCGCCGC ACCTAAAGAC AAAGTCTCAC CCCATAAATC TCACTTGATT GGCGAAATTG CTTGTACGAG CTGCCATAAA GGTCATGAAA AATCAGTCGC CTATTGCGAT GCTTGCCACA GCTTCGGCTT CGATATGCCT TATGGCGGCA AGTGGGAACG TAAGTTTGTT CCTGTTGATG CTGACAAAGC GGCACAAGAT AAAGCCATTG CCGCTGGCGT AAAAGAAACC ACTGATGTGG TTATTATCGG TTCAGGTGGT GCGGGCCTTG CTGCTGCAGT ATCAGCCCGT GATGCCGGCG CAAAAGTAAT CCTGCTCGAA AAAGAACCTG TCCCAGGTGG TAACACTAAA CTGGCTGCTG GCGGTATGAA CGCTGCCGAA ACTAAGGCGC AAGCTAAGTT AGGTATTGAA GATAAGAAAC AAATCATGAT CGACGACACC ATGAAAGGTG GCCGTAACAT TAACGATCCT GAATTAGTGA AAGTGCTTGC GAATAACTCT TCAGACTCTA TCGATTGGTT AACCTCTATG GGTGCCGATA TGACCGACGT AGGCCGTATG GGTGGCGCAA GTGTTAACCG CAGTCACCGC CCAACTGGTG GCGCTGGCGT AGGTGCACAC GTTGCGCAAG TGCTGTGGGA CAATGCAATC AAACGTGGTA CAGACATCCG CTTAAACAGC CGTGTTGTCC GTATTATTGA AGATGCGAAA GGCAATGTGA CTGGCGTACT CGTAAAAGGC GAATACACTG GCTACTACAT AATCAAAGCC GATGCCGTTG TTATTGCTGC CGGTGGTTTT GCGAAAAACA ACGACCGCGT AGCTAAATAC GATCCTAAGT TAAAAGGCTT TAAAGCCACT AACCACCCAG GTGCAACCGG TGACGGCTTA GACGTAGCGC AACAAGCAGG CGCAGCAACT CGCGATTTAG AGTTCATTCA AGCTCACCCA ACTTACTCAC CAGCGGGTGG CGTGATGATC ACCGAAGCGG TACGTGGTAA CGGTGCTATC GTGGTTAACC GTGAAGGTAA CCGCTTTATG AACGAAATCA CTACCCGTGA TAAAGCGTCT GCCGCGATTC TGCAACAAAA AGGCGAAAGT GCTTATCTGG TGTTCGATGA CTCAATCCGT AAGAGCTTAA AAGCGATTGA AGGTTATGTG CATCTGAACA TTGTTAAAGA AGGCAAAACT GTCGAAGAGT TAGCAAAACA AATTGATGTG CCCGCCGCTG AACTGGCTAA AACCATCACG GCATACAACG GTTTCGTGAA ATCAGGTAAA GATGCGCAAT TTGAACGTCC AAACCTACCA CGCGAATTAG CAGTAGCACC TTTCTACGCA TTAGAAATCG CACCTGCTGT TCACCACACT ATGGGTGGCG TTGTGATTGA TACTAAAGCC GAAGTGAAGA GCGAAAAAAC CGGTAAACCA ATCCAAGGCT TATATGCCGC AGGTGAAGTG ACTGGCGGTG TTCACGGTGC TAACCGTCTA GGCGGTAACG CAGTATCTGA CATTGTGACC TACGGCCGTA TCGCCGGTGC TGAAGCGGCT AAATTCGCTA AAGATCACTA G
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Protein sequence | MFTRKIQKTA LAMLISGAMA GTAYAAPEVL ADFHGEMGSC DSCHVSDKGG VSDDNLSHEN AQCVSCHGDL KELAAAAPKD KVSPHKSHLI GEIACTSCHK GHEKSVAYCD ACHSFGFDMP YGGKWERKFV PVDADKAAQD KAIAAGVKET TDVVIIGSGG AGLAAAVSAR DAGAKVILLE KEPVPGGNTK LAAGGMNAAE TKAQAKLGIE DKKQIMIDDT MKGGRNINDP ELVKVLANNS SDSIDWLTSM GADMTDVGRM GGASVNRSHR PTGGAGVGAH VAQVLWDNAI KRGTDIRLNS RVVRIIEDAK GNVTGVLVKG EYTGYYIIKA DAVVIAAGGF AKNNDRVAKY DPKLKGFKAT NHPGATGDGL DVAQQAGAAT RDLEFIQAHP TYSPAGGVMI TEAVRGNGAI VVNREGNRFM NEITTRDKAS AAILQQKGES AYLVFDDSIR KSLKAIEGYV HLNIVKEGKT VEELAKQIDV PAAELAKTIT AYNGFVKSGK DAQFERPNLP RELAVAPFYA LEIAPAVHHT MGGVVIDTKA EVKSEKTGKP IQGLYAAGEV TGGVHGANRL GGNAVSDIVT YGRIAGAEAA KFAKDH
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