| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3614 |
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| Symbol | lysS |
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| ID | 5755428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4257048 |
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| End bp | 4258550 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641289957 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001556036 |
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| Protein GI | 160876720 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.659377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AAGTAATTGA TGAGAACAAA CTGATCGCCG AGCGCCGTGC CAAGCTAGAA
AGCATCCGCC CAAACTGTAG TGCTAATGCG CATCCAAATA CCTTCCGTCG CACCCATAAA
GCGGCTGAAC TGCAAGCACA GTATGGTCAA AACACTAAAG AAGAACTCGA AGCCTTAGGT
TTTAAGACCA GCATTGCTGG CCGCATCATG GCAAAACGTG GTCCTTTCTT AGTGATCCAA
GACGTGTCTG GCCGTATTCA AGCCTATGCT GAAAAAAGCG TACAAGCTGA TTTGAAAGAG
CGTTTTCAAG GTCTGGATAT CGGTGACATT ATCGGTGTAA CCGGTCAGCT GCATTTGTCT
GGCAAAGGCG ACTTATACGT CAACATGGAA CAGTACGAGC TACTGACCAA GGCGCTGCGT
CCATTGCCTG CGGACTATTA TGGTCTCGCC GATCAAGAAA TGCGCTACCG TCAACGTTAC
GTGGATCTGA TCGTTAACGA AGATTCTCGC AATGCCTTTA TCATGCGTTC TAAAGTGGTT
TCTGCAATCC GTAACTTCAT GATCAAAAAA GAGTTCATGG AAGTTGAAAC CCCTATGATG
CACGTGATCC CAGGTGGCGC TTCGGCCCGT CCTTTTATCA CTCATCACAA CGCCTTAGAC
ATGCCAATGT ACCTGCGTAT CGCGCCAGAA TTATATCTGA AGCGTTTAGT GGTAGGTGGT
TTTGAGCGTG TGTTCGAAAT CAACCGTAAC TTCCGTAACG AAGGTCTGTC GCCACGTCAT
AACCCAGAAT TCACTATGAT GGAATTCTAT ATGGCTTATG CAGACTACAA AGATCTGATG
GACTTAACCG AAGAAATGCT CAGCTCGATT GCTATCGAAC TGCTCGGCAG TGCGCAAATG
CCATACGGCG AGCACACTGT TGATTTCGGT GGCCCATACG CACGTTTAAG CATGTTAGAA
GCAATTCAGA AGTACAATCC TGATAACGCC ACTATCCAAG CTATGACCTA TGAGCAAGTG
AAAGATGTTG AATTCATGCG CGATCTAGCG AAAAGCTTAG GTATGAAGAT TGAGAAGTTC
TGGACTTGTG GTCAGCTGCT TGAAGAAATC TTCGGTGAAA CCGCTGAATG GCAATTGATG
CAACCGACGT TCATCACTGG CTACCCTGCG GACATTTCAC CACTGGCACG TCGTAACGAT
GACAACCATT TCATCACTGA CCGTTTCGAA TTCTTCATCG GTGGCCGCGA AGTGGCTAAC
GGCTTTAGCG AGCTGAACGA TGCTGAAGAT CAAGACAACC GCTTTAAAGC GCAGGTTGAC
GCGAAAGATG CTGGCGACGA TGAAGCTATG TTCTACGATG CAGACTATAT CACTGCACTA
GAGCACGGTT TGCCACCAAC GGCAGGTCAA GGTATTGGTA TCGACCGTTT AGTGATGTTG
TTCACTAACA CTCATACTAT CCGTGACGTG ATCCTGTTCC CAGCGATGCG CCCACAGGCG
TAA
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| Protein sequence | MTEQVIDENK LIAERRAKLE SIRPNCSANA HPNTFRRTHK AAELQAQYGQ NTKEELEALG
FKTSIAGRIM AKRGPFLVIQ DVSGRIQAYA EKSVQADLKE RFQGLDIGDI IGVTGQLHLS
GKGDLYVNME QYELLTKALR PLPADYYGLA DQEMRYRQRY VDLIVNEDSR NAFIMRSKVV
SAIRNFMIKK EFMEVETPMM HVIPGGASAR PFITHHNALD MPMYLRIAPE LYLKRLVVGG
FERVFEINRN FRNEGLSPRH NPEFTMMEFY MAYADYKDLM DLTEEMLSSI AIELLGSAQM
PYGEHTVDFG GPYARLSMLE AIQKYNPDNA TIQAMTYEQV KDVEFMRDLA KSLGMKIEKF
WTCGQLLEEI FGETAEWQLM QPTFITGYPA DISPLARRND DNHFITDRFE FFIGGREVAN
GFSELNDAED QDNRFKAQVD AKDAGDDEAM FYDADYITAL EHGLPPTAGQ GIGIDRLVML
FTNTHTIRDV ILFPAMRPQA
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