Gene Sbal195_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3604 
Symbol 
ID5755418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4242438 
End bp4243934 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content46% 
IMG OID641289947 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_001556026 
Protein GI160876710 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.352008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAATG ATGGCTACAC TTCCCTAAGC AATTTTATCG ACCTTCTCTT GGATGCTATT 
TGCGTCGTCG ATAAAGATGG GCGGTTTGAA TTTGTCAGTG CCGGGGCAGA ACGCATTTTT
GGCTATACCC CAGAAGAAAT GATTGGCATG CAGATGCTCG ATCTTGTTAT TCCTGAGGAT
AGAGAGCGCA CACTCGCAAC CGCCAATGAG ATTATGACTG GCCGCTATAA GGTCGATTTC
GAAAACCGTT ATGTGCGTAA AGACGGCGTC ATTGTCGATA TTTTGTGGTC CGCACGCTGG
TCCGATGCTT ACCAACAACG CGTCGCGGTC GCCAGAGATA TCTCTAAGAG TAAAAACGCC
GAACGCAGAC AAGCTGCACT GTATGAGATT TCTGAAGCTG TGCATGTCGC TGAGGATTTG
CTAGCCCTAT ATCGCCGTAT CCATGAAATC ATTGCTAAAT TGCTGCCCGC GGCAAACTTT
GCCATCGCAT TGTACGATCA AGATTTAAAT GAACTCAGTT TCCCTTACAA AGCCGCTGCG
GGTGATAATT CACTGGTCGA TATTGCAAGT TTCAGCTTGT TTACCGAACA AGTGATCCAC
AGTGCAGAAT CTTTACTCCT GTGTCCCGTG ACCTTATCTG AGTATCCCCA AGCCATTCGT
GAAGAGCTGG GTAATGGCAA TTTAAGTTGG TTGGGTGTGC CGCTAAAGCT GCAAAAAGGT
GTTATCGGTG CCTTGATGAT GCATAGCTTG CCCACTTCGG CTTCTTATAC GCACCAAGAC
CGTGAGCTAT TGGAGTTTGT TTCTACGCAA ATTGCCTTTG CGATTGAACG CCGACAAATG
CTTGCGCGAT TAGAGCATAT TGCGCTGTAT GATCAGCTAA CCCTGTTGCC CAATCGCGAG
CTTTTTTACG ACAGGTTTCA AAAGGCGCTA TCCCGAGCCC ATAGGGAATC AAGTTATTTC
TCTTTACTTT ATTTAGATTT AGATAAGTTT AAGTGGGTAA ACGATACCTT TGGTCATAGT
GTGGGCGATT TATTGCTGCA AGTGACAGCA CAACGTATTG TCAGCTGTGT AAGGGGCTCA
GATACCGTAG CGCGTTTTGG GGGCGACGAG TTTGTCATCT TACTCGAGCG CGTTGATTCG
GCACAAAATA CCCTGTTGGC AGCGCAAAAA ATATTACAAG TGCTCAATCA ACCCTTTGAG
CTTACCGATC AGCAAATCCA TATTTTACCG AGTATCGGTA TTGCCCTGTA TCCAGAGCAC
GGCACGGATG AAAAACAGTT ACTTTCCTGT GCGGATGCAG CCATGTATAA GGCTAAGAAA
AATGGGGGCA ATCGCATTGA AATGGGTTAT CAAGGGCTGA GAAATCTGCA TGCAGATCCT
CTGACTGCGG CTCCTGAGTT AAAGAGCGCT GAGTTAAAAG ACACTGAGTT AGAAGACCGT
GAATTAAAAG ACACTGAGTT AAATAACCTT GAAAACAAGG TGACTAAGAT AGTGTGA
 
Protein sequence
MNNDGYTSLS NFIDLLLDAI CVVDKDGRFE FVSAGAERIF GYTPEEMIGM QMLDLVIPED 
RERTLATANE IMTGRYKVDF ENRYVRKDGV IVDILWSARW SDAYQQRVAV ARDISKSKNA
ERRQAALYEI SEAVHVAEDL LALYRRIHEI IAKLLPAANF AIALYDQDLN ELSFPYKAAA
GDNSLVDIAS FSLFTEQVIH SAESLLLCPV TLSEYPQAIR EELGNGNLSW LGVPLKLQKG
VIGALMMHSL PTSASYTHQD RELLEFVSTQ IAFAIERRQM LARLEHIALY DQLTLLPNRE
LFYDRFQKAL SRAHRESSYF SLLYLDLDKF KWVNDTFGHS VGDLLLQVTA QRIVSCVRGS
DTVARFGGDE FVILLERVDS AQNTLLAAQK ILQVLNQPFE LTDQQIHILP SIGIALYPEH
GTDEKQLLSC ADAAMYKAKK NGGNRIEMGY QGLRNLHADP LTAAPELKSA ELKDTELEDR
ELKDTELNNL ENKVTKIV