Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3604 |
Symbol | |
ID | 5755418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4242438 |
End bp | 4243934 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641289947 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001556026 |
Protein GI | 160876710 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.352008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAATG ATGGCTACAC TTCCCTAAGC AATTTTATCG ACCTTCTCTT GGATGCTATT TGCGTCGTCG ATAAAGATGG GCGGTTTGAA TTTGTCAGTG CCGGGGCAGA ACGCATTTTT GGCTATACCC CAGAAGAAAT GATTGGCATG CAGATGCTCG ATCTTGTTAT TCCTGAGGAT AGAGAGCGCA CACTCGCAAC CGCCAATGAG ATTATGACTG GCCGCTATAA GGTCGATTTC GAAAACCGTT ATGTGCGTAA AGACGGCGTC ATTGTCGATA TTTTGTGGTC CGCACGCTGG TCCGATGCTT ACCAACAACG CGTCGCGGTC GCCAGAGATA TCTCTAAGAG TAAAAACGCC GAACGCAGAC AAGCTGCACT GTATGAGATT TCTGAAGCTG TGCATGTCGC TGAGGATTTG CTAGCCCTAT ATCGCCGTAT CCATGAAATC ATTGCTAAAT TGCTGCCCGC GGCAAACTTT GCCATCGCAT TGTACGATCA AGATTTAAAT GAACTCAGTT TCCCTTACAA AGCCGCTGCG GGTGATAATT CACTGGTCGA TATTGCAAGT TTCAGCTTGT TTACCGAACA AGTGATCCAC AGTGCAGAAT CTTTACTCCT GTGTCCCGTG ACCTTATCTG AGTATCCCCA AGCCATTCGT GAAGAGCTGG GTAATGGCAA TTTAAGTTGG TTGGGTGTGC CGCTAAAGCT GCAAAAAGGT GTTATCGGTG CCTTGATGAT GCATAGCTTG CCCACTTCGG CTTCTTATAC GCACCAAGAC CGTGAGCTAT TGGAGTTTGT TTCTACGCAA ATTGCCTTTG CGATTGAACG CCGACAAATG CTTGCGCGAT TAGAGCATAT TGCGCTGTAT GATCAGCTAA CCCTGTTGCC CAATCGCGAG CTTTTTTACG ACAGGTTTCA AAAGGCGCTA TCCCGAGCCC ATAGGGAATC AAGTTATTTC TCTTTACTTT ATTTAGATTT AGATAAGTTT AAGTGGGTAA ACGATACCTT TGGTCATAGT GTGGGCGATT TATTGCTGCA AGTGACAGCA CAACGTATTG TCAGCTGTGT AAGGGGCTCA GATACCGTAG CGCGTTTTGG GGGCGACGAG TTTGTCATCT TACTCGAGCG CGTTGATTCG GCACAAAATA CCCTGTTGGC AGCGCAAAAA ATATTACAAG TGCTCAATCA ACCCTTTGAG CTTACCGATC AGCAAATCCA TATTTTACCG AGTATCGGTA TTGCCCTGTA TCCAGAGCAC GGCACGGATG AAAAACAGTT ACTTTCCTGT GCGGATGCAG CCATGTATAA GGCTAAGAAA AATGGGGGCA ATCGCATTGA AATGGGTTAT CAAGGGCTGA GAAATCTGCA TGCAGATCCT CTGACTGCGG CTCCTGAGTT AAAGAGCGCT GAGTTAAAAG ACACTGAGTT AGAAGACCGT GAATTAAAAG ACACTGAGTT AAATAACCTT GAAAACAAGG TGACTAAGAT AGTGTGA
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Protein sequence | MNNDGYTSLS NFIDLLLDAI CVVDKDGRFE FVSAGAERIF GYTPEEMIGM QMLDLVIPED RERTLATANE IMTGRYKVDF ENRYVRKDGV IVDILWSARW SDAYQQRVAV ARDISKSKNA ERRQAALYEI SEAVHVAEDL LALYRRIHEI IAKLLPAANF AIALYDQDLN ELSFPYKAAA GDNSLVDIAS FSLFTEQVIH SAESLLLCPV TLSEYPQAIR EELGNGNLSW LGVPLKLQKG VIGALMMHSL PTSASYTHQD RELLEFVSTQ IAFAIERRQM LARLEHIALY DQLTLLPNRE LFYDRFQKAL SRAHRESSYF SLLYLDLDKF KWVNDTFGHS VGDLLLQVTA QRIVSCVRGS DTVARFGGDE FVILLERVDS AQNTLLAAQK ILQVLNQPFE LTDQQIHILP SIGIALYPEH GTDEKQLLSC ADAAMYKAKK NGGNRIEMGY QGLRNLHADP LTAAPELKSA ELKDTELEDR ELKDTELNNL ENKVTKIV
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