| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3593 |
|---|
| Symbol | |
|---|
| ID | 5755407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4227902 |
|---|
| End bp | 4228339 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641289936 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001556015 |
|---|
| Protein GI | 160876699 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.741645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT GGTTTAGAGC TGTCACGTTA GAGGATTGCG CGCGCTTAGA TGCCGGTATG
GGCGGCAAAG GCACCTTGAT GCAGACCTTA GGGATTGAGA TCAGTGAAAT TGGCGACGAT
TACATGAAGG CTACTATGCC TGCGAGCCCT GCGGTGCATA ACCCTTTGGG GATAGTCCAT
GGCGGCGCGA ATGTTGCGCT TGCTGAAACC GTTGCCAGCT ATGCAGCAAA CTTTGCGGTG
GATTTTGAGC AGTACTATTG TGTCGGCCAA GAAATTAACG CTAACCACTT ACGGGCTTCC
CGTAATGGGC TATTAACCGC CACGGCTAAG CCTATTCATT TAGGAAAACG CAGCTCTGTA
TGGGAAGTGT TAATCCATAA CAGCGCCGGT GAACTGACTT GTATTTCACG GATGACGGCG
GCTGTCGTTA AACGTTAA
|
|---|
| Protein sequence | MSIWFRAVTL EDCARLDAGM GGKGTLMQTL GIEISEIGDD YMKATMPASP AVHNPLGIVH
GGANVALAET VASYAANFAV DFEQYYCVGQ EINANHLRAS RNGLLTATAK PIHLGKRSSV
WEVLIHNSAG ELTCISRMTA AVVKR
|
|---|
| |