| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3574 |
|---|
| Symbol | |
|---|
| ID | 5755388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4203109 |
|---|
| End bp | 4204116 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641289917 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_001555996 |
|---|
| Protein GI | 160876680 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0902156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG ATTTACCCTT GATTTGGTTC GGGATCATCA TTTTTGCCAC CTTGATGTAT
ATCGTGATGG ATGGCTTTGA TCTCGGCATC GGCATACTGT TTCCCTTTAT CCACGACGAG
GATGACAGGG ACATTATGGT CAATACCGTC GCCCCCGTTT GGGATGGTAA TGAAACCTGG
TTAGTGCTCG GCGGCGCCAG CCTGCTCGGT GCCTTTCCCC TCGCCTACGC CATAGTGCTC
GAAGCGCTGA CCATACCGCT GCTTATTATG TTGCTGGCAC TGATATTTCG CGGCGTGGCG
TTTGAGTTTA GATTTAAGTC GGGCGCAGAA GCTAAACCAT TCTGGGATAA AGCGTTTATG
TTCGGCTCTA TCACTGCCAC CTTTTCACAG GGCGTAGTAC TGGGGGCGTT TATCTCGGGC
ATTTCGGTCA GCGAGCAGCA ATTTAGCGGA GGTAGTTTCG ATTGGTTAAC GCCCTTCTCA
CTCTTCTGTG GATTTGGCCT TATGCTGGCC TATGCTTTGC TCGGCGCAAC TTGGCTGGTA
AAAAAATGCG AAGGCGAGCT TAAAACGACC ATGCAACAAC TCAGCAGAGC ACTGACTTTA
TGCTTACTTA TGACCATTGG CTTAGTCAGT TTATGGACGC CTTTTGTGCA GCCCAATATT
GCCCTGCGCT GGTTTAGTTT GCCGAATTTA TTCTATTTCG CCCCAGTGCC CATACTGGTA
TTAGCCTGCG GCTGGGCCTT GATGAAATCT TTGCGCCGCG ATGATAACTA TCAGCCATTC
CTGCTCACAC TATGCCTGGT TTTTTTAGGT TTTAGTGGAC TCGGGATCAG TATCTGGCCA
CACATTATTC CGCCCAATAT CAGCCTTTGG CAGGCGGCAG CGCCCGATAG CAGCTTAAGC
TTTATGCTCG TCGGCGCGCT GATGATCATC CCGCTGATTT TGGTTTACAC CTTTTGGAGC
TACTACGTGT TCCGCGGCAA AGTCACTAAA GATACAGGCT ATCACTAG
|
|---|
| Protein sequence | MEFDLPLIWF GIIIFATLMY IVMDGFDLGI GILFPFIHDE DDRDIMVNTV APVWDGNETW
LVLGGASLLG AFPLAYAIVL EALTIPLLIM LLALIFRGVA FEFRFKSGAE AKPFWDKAFM
FGSITATFSQ GVVLGAFISG ISVSEQQFSG GSFDWLTPFS LFCGFGLMLA YALLGATWLV
KKCEGELKTT MQQLSRALTL CLLMTIGLVS LWTPFVQPNI ALRWFSLPNL FYFAPVPILV
LACGWALMKS LRRDDNYQPF LLTLCLVFLG FSGLGISIWP HIIPPNISLW QAAAPDSSLS
FMLVGALMII PLILVYTFWS YYVFRGKVTK DTGYH
|
|---|
| |