Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3565 |
Symbol | |
ID | 5755379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4190532 |
End bp | 4191041 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641289908 |
Product | S-ribosylhomocysteinase |
Protein accession | YP_001555987 |
Protein GI | 160876671 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00065018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAC TTGATAGCTT TACCGTCGAT CATACTCGAA TGAATGCCCC AGCGGTTCGT GTTGCTAAGC ATATGAGCAC GCCAAAGGGT GATGCGATTA CGGTATTCGA TCTACGTTTT TGCGCACCGA ATAAAGATAT TCTCAGTGAG CGTGGTATTC ACACTCTGGA GCATTTATTC GCTGGCTTTA TGCGTGACCA TTTAAATGGT AGCAATGTTG AGATCATCGA TATTTCGCCA ATGGGATGTC GTACCGGCTT TTATATGAGT TTGATTGGAG AGCCGACTGA GCGCCAAGTG GCCGATGCGT GGTTAGCTGC GATGGAAGAT GTGCTTAAAG TGGTTGAGCA GTCTGAAATC CCTGAGCTGA ACGAATACCA ATGCGGTACG TATGAGATGC ATTCGTTAGA GCAGGCACAA GATATCGCCC GTAATATTAT TGCGGCTGGC GTGAGTGTGA ATCGCAATGA TGATTTGAAA TTAAGCGACG AAATTCTAGG TAATCTGTAA
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Protein sequence | MPLLDSFTVD HTRMNAPAVR VAKHMSTPKG DAITVFDLRF CAPNKDILSE RGIHTLEHLF AGFMRDHLNG SNVEIIDISP MGCRTGFYMS LIGEPTERQV ADAWLAAMED VLKVVEQSEI PELNEYQCGT YEMHSLEQAQ DIARNIIAAG VSVNRNDDLK LSDEILGNL
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