Gene Sbal195_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3564 
Symbol 
ID5755378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4188312 
End bp4190366 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content48% 
IMG OID641289907 
ProductTonB-dependent receptor 
Protein accessionYP_001555986 
Protein GI160876670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4772] Outer membrane receptor for Fe3+-dicitrate 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000148134 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGTC GTTACTTCTC AGTATCACTC TGTGCAATGT CTGTATCTCT TGCCTGTTCT 
AGCACAACGT TCGCCGATGA TTTCCACAGT CAAATGCTTG AACTGAACCT GCTCAATGAC
ACATTCCACT CAACTGCTGA CAGTTTAGCC TTAGGCCAGT TAACGGCTTT GACGGTTTTA
CCTGCGGATC TTAACGGAAA TCCAGCAAGC ATTAGTATGC GCAGCGCGAG TCAAGGCGTG
GCCGTATTGC AAGATAGAGT GTATTTCTCA CCTGCGCCTT ATTCTGCGCC GCAATTACAA
CTATTGCCCA ATCTGCTGCA ACAACAGAGT GTCACCGTCA CGCCAATGGC GAATATGGCT
GTTGGTGGGC AAGGGGCGTT TGGGGTGGTG AGTTATCAAA CCTTACCCGT GGCCGAACAA
GCGGAAAACA GTAAAGTAAC GCTCGAAGGC AATACCGATG CCGATTACAG TGTCGATGTG
AATTGGGGCG TGAAGCAAAA AGAATACGGC ATGATACTCG CGGTTAACTA CAGTGATGGT
AGCTGCGCCG AGCACTTACT CAATGGCCAA GATACTGACC GCCAAACCAC TGATATCTTA
TTTAAAATCA ATGCTGCGAG TTTATTAGGT GCCCGAAGTC CGCAGGTGAC TGAGTTTACC
TATCAGTTCC TCGATGATGA TAGCTATCGC TCCCAACTCG GCTTAACACA GGCCGATTGG
CAACAAGACC CGATGAGTTT GTATTCGACC ACGGCTGGAG ATAAGCACCA AGGGCGACAC
CATAAGTATC AATTGTCGCA CCAAGTTGCG TTAAGTGGCG GGCATAAGGT CATCACGGAC
TTTTATTATC AATCCTATTC GCAGCAATTA AATCAACTTA ATCAATTTGA TGGGCAAATG
CTCGATACCC AGAGTTTAGC AGCGCTGGCC GCATTTGAAC GGCAGCCGAC AGTCGATGGT
GTCGCGGTCG CTTCGTTACA ACAAGACAAT GATTTTAGCT CCTTTGGGGT ACAAACTGAG
TCCGTGAATC AATATGGCGC CCATCAAATT AGTTTGAGTG CCCGTTACCA TACTGATAAA
GCTGAGATGC ACCTTGGTGA ACAGCAAAGT CTATGGCAGC AGGACTTGAG TTTAGTGAGT
GATGCGCCAG ATGCGCTGTT GGCTTATACC GATGATGCGA CTGCATTCAC CTCGGCCATC
GATTCCTTGT TTAATTGGGA CGGATTGCAG CTCAAACTCG CGCTTGCCTA TGAAAAAGTG
GACGTCAATC GCGAGATCAA TCTAGCCTAC GCCGGACTCG AAGCGGCGGA TTTTTCTGAC
AGCGATTGGA TGCCACAACT TGGCGTTTCA TATCATGCTG GAGATTGGCG CTTTAGTACG
GATATTCGAC GTTCATGGAC CGCCGCGAGT GCGGGGAATC TTGAGCAAGA GGCGCAAGTG
TCACTGCAAT ATCAAGTCAG CGCCCAATAT GCCAGCGAGC ATTTTAGTGC TGACATCAAA
ACCTACGTCC AAGATTTTGA TAATCTGCAT GTCAATTGCG ATGCGTATAC CCAATGTGCC
GACAGCCGTT TGTGGGTTCA AGGCAATGTC GTGGATGTGC TGACCAAAGG GGTTGAGCTG
AATCTTGGCT ATCAGTGGGA TCTGGGCAGT GTGCAGTTGC CTTTAGCATT AAATTATCAG
TATTCGAATG CCGAGTATCA AACCAATAGC TGCAACGAAA TCCAGGGCTG CGTCGTGGCT
GGCGATAGGG TGGCTTGGTT ACCCGAGCAG CAACTGCAGT TGAGTGCAGG GATGAAATAT
GCCGAATATG AACTGAACGC GAATGTCTTT TATCAATCGG AGCGGGAAAT GGGCCAATTT
GGCGCCGAAT TACAGCCTGT CGCTGCACAA TGGCGGGTAG ATTTAGCGGC GAATTATCAT
TTTAACCGTC ACCATGAGAT TTATTTTCGG ATAGAAAACC TCTTAGATGA GACATTAGTC
ACGACAGCAT CAAATAGCGG AATTCGATCG GAAAATGGAC GTATTAGCTA TTTAGGTTAT
CAATGGCGCT TTTAA
 
Protein sequence
MPSRYFSVSL CAMSVSLACS STTFADDFHS QMLELNLLND TFHSTADSLA LGQLTALTVL 
PADLNGNPAS ISMRSASQGV AVLQDRVYFS PAPYSAPQLQ LLPNLLQQQS VTVTPMANMA
VGGQGAFGVV SYQTLPVAEQ AENSKVTLEG NTDADYSVDV NWGVKQKEYG MILAVNYSDG
SCAEHLLNGQ DTDRQTTDIL FKINAASLLG ARSPQVTEFT YQFLDDDSYR SQLGLTQADW
QQDPMSLYST TAGDKHQGRH HKYQLSHQVA LSGGHKVITD FYYQSYSQQL NQLNQFDGQM
LDTQSLAALA AFERQPTVDG VAVASLQQDN DFSSFGVQTE SVNQYGAHQI SLSARYHTDK
AEMHLGEQQS LWQQDLSLVS DAPDALLAYT DDATAFTSAI DSLFNWDGLQ LKLALAYEKV
DVNREINLAY AGLEAADFSD SDWMPQLGVS YHAGDWRFST DIRRSWTAAS AGNLEQEAQV
SLQYQVSAQY ASEHFSADIK TYVQDFDNLH VNCDAYTQCA DSRLWVQGNV VDVLTKGVEL
NLGYQWDLGS VQLPLALNYQ YSNAEYQTNS CNEIQGCVVA GDRVAWLPEQ QLQLSAGMKY
AEYELNANVF YQSEREMGQF GAELQPVAAQ WRVDLAANYH FNRHHEIYFR IENLLDETLV
TTASNSGIRS ENGRISYLGY QWRF