| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3525 |
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| Symbol | carB |
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| ID | 5755339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4142562 |
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| End bp | 4145786 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641289868 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001555947 |
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| Protein GI | 160876631 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAGAGTATT CTTATCCTAG GCGCCGGCCC AATCGTGATT
GGTCAGGCAT GTGAATTTGA CTATTCTGGC GCACAGGCGT GTAAAGCGCT GCGTGAAGAA
GGCTACCGTG TCATTCTGGT GAACTCTAAC CCTGCCACCA TTATGACTGA CCCAGAAATG
GCCGATGCCA CTTATATCGA GCCGATTCAC TGGGAAGTGG TCCGTAACAT TATTGCTAAA
GAACGCCCAG ATGCGATTCT GCCAACCATG GGCGGCCAAA CCGCACTGAA CTGCGCATTA
GAACTCGAAG CTAAAGGCGT ACTGAAAGAA TTTAACGTCG AGATGATTGG CGCGACTGCC
GATGCCATCG ATAAAGCTGA AGACCGTAGC CGCTTTGATA AAGCGATGAA AAGTATCGGT
CTTGACTGTC CACGTGCGGG CATTGCCCAC AACATGGAAG AAGCTTACGG CGTACTCGAT
CAAGTGGGTT TCCCTTGTAT TATCCGTCCA TCTTTTACTA TGGGTGGCTC GGGCGGCGGT
ATCGCCTACA ACAAGGAAGA GTTTGAAGAG ATCTGTTCAC AGGGCTTAGA GTTATCGCCA
ACAAGTGAAC TGCTGATCGA CGAATCACTG ATCGGTTGGA AAGAATACGA GATGGAAGTG
GTACGTGACC GCAACGATAA CTGTATTATC GTCTGCGCCA TCGAAAACTT CGATCCTATG
GGTGTACACA CCGGCGACTC TATTACCGTT GCGCCAGCAC AAACCCTGAC TGACAAAGAA
TACCAAATCA TGCGTAACGC CTCTATGGCC GTACTGCGTG AGATTGGTGT TGAGACCGGC
GGTTCGAACG TACAGTTTGG TATCAACCCG AAAGATGGCC GTATGGTTAT CATCGAGATG
AACCCACGTG TATCGCGCTC TTCAGCATTG GCATCAAAGG CAACGGGTTT CCCGATTGCG
AAAATCGCCG CTAAGTTAGC GGTCGGTTTT ACCCTTGATG AGCTGATGAA CGACATCACT
GGCGGTCGCA CGCCAGCGTC ATTCGAGCCT GCTATCGATT ACGTTGTGAC TAAAGTGCCA
CGCTTTAACT TTGAAAAGTT TGCTGGCGCC AATGATCGCT TAACCACACA GATGAAGTCT
GTGGGTGAAG TGATGGCGAT TGGCCGTACT TTCCAAGAGT CACTGCAAAA AGCCTTACGT
GGTTTAGAAG TTAACCGTAA CGGTTTAGAC CCTATCACTG ACATGTCTAA GCCTGAAGCG
ATGGCGCGTA TTCGCCTTGA ACTGAAAGAG CCTGGCTGCG ACCGTATTTG GTACATAGCC
GATGCGATGC GTGCGGGGCT GAGCTTAGAT GAAATCTTTA AGCTGACCAA TATCGACCCT
TGGTTCCTCG TACAAATCGA AGAACTGGTT CAGCTTGAAG GTGTTGTTGC TGACGCGGGT
CTAGCGGGTC TGGATATCGA CTTACTGCGC AAACTAAAAC GTAAAGGTTT TGCCGATGCG
CGTCTGGCCG ATGTATTAGG CGTGAACGAA GCCGAAGTGC GTAAGCTGCG TGACAAGTTT
GACCTGCACC CAGTCTACAA ACGTGTGGAT ACCTGTGCGG CTGAGTTTGC AACAGACACA
GCTTACATGT ACTCAACGTA CGAAGAAGAA TGTGAAGCTA ACCCATCGAC CCGTGACAAA
ATCATGGTGT TAGGTGGCGG GCCAAACCGT ATCGGTCAAG GTATTGAGTT CGATTATTGC
TGTGTGCACG CGGCGTTAGC GCTACGTGAA GACGGTTATG AAACCATCAT GGTGAACTGT
AACCCTGAAA CCGTTTCAAC CGACTACGAC ACATCAGATC GTTTGTACTT CGAACCAGTA
ACACTGGAAG ACGTATTAGA AATCGTCCGT ATCGAGAAGC CAAAAGGCGT TATCGTGCAG
TACGGTGGTC AAACGCCATT GAAATTGGCC CGTGCCTTAG AAGCCGCTGG CGTACCTGTC
ATTGGTACTA GCCCAGATGC AATCGACCGC GCCGAAGACC GTGAGCGTTT CCAGCAAGCG
ATTCAACGCT TAGAGATGAA GCAGCCTGAA AACGATACCG TGACTACGGT TGAAGGTGCT
GTGATTGCCG CTGAGCGTAT CGGTTATCCG TTAGTTGTGC GTCCATCCTA TGTACTGGGC
GGCCGCGCGA TGGAAATCGT CTACGACAAG CAAGATTTGC TGCGTTACTT CAACGAAGCC
GTGAGCGTAT CGAACGCGTC GCCAGTACTG CTCGATCGCT TCTTAGATGA TGCGATTGAA
GTGGATATCG ATGCAGTATG TGACGGTGAA ATCGTGGTGA TTGGCGCGAT TATGGAGCAT
ATCGAACAAG CGGGTGTTCA CTCAGGTGAC TCAGGTTGTT CGCTGCCGCC ATACACGCTA
AGCCAAGAAA TCCAAGATCG CATGCGCGTT CAAGTCGGTA AGTTGGCGAT GGAGCTCGGT
GTTGTCGGCC TGATGAACGT ACAGTTCGCC GTGAAAGATA ACGAAATCTA TATGATTGAA
GTTAACCCAC GTGCTGCCCG TACTGTGCCA TTTGTGTCCA AAGCAACGGG TGTGCCTTTA
GCTAAGATTG CCGCGCGTGT GATGGCGGGT CAAAGCTTAA CGTCGCAAAA CTTCACTAAA
GAAGTGATCC CACCTTTCTA CTCAGTGAAA GAAGTGGTGT TGCCATTTAA CAAGTTCCCG
GGTGTTGACC CACTGTTAGG CCCAGAAATG CGCTCTACCG GTGAAGTCAT GGGCGTGGGC
GATACGTTCG CCGAAGCCTA TGCCAAGGCG CAGTTAGGTG CCACTTCTGA AGTGCCTAAG
TCGGGTCGTG CGTTATTGTC TGTGCGTAAC AGCGATAAGA AACGCGTTGC CGATTTAGCG
GCTAAGTTAA TCGAGCTCGG TTACCAAATC GATGCCACTC ACGGTACTGC GATTATCCTA
GGCGAAGCGG GTATCAACCC ACGTCTAGTG AACAAGGTAC ACGAAGGTCG TCCACACATT
CTCGATCGCA TCAAGAATGG TGAATACACT TATATCGTGA ACACTACCGA AGGTCGCCAA
GCGATTGAAG ATTCTCGTCA ATTGCGCCGC GGTGCACTGC GTTACAAAGT TAACTACACC
ACGACCATGA ACGCTGCATT CGCCACATGT ATGGCCCATG CCGCTGATGA TCGTACTAAT
GTGACGTCAG TACAAGAACT GCATTTACGC GTACTGGCTA AATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLKE FNVEMIGATA
DAIDKAEDRS RFDKAMKSIG LDCPRAGIAH NMEEAYGVLD QVGFPCIIRP SFTMGGSGGG
IAYNKEEFEE ICSQGLELSP TSELLIDESL IGWKEYEMEV VRDRNDNCII VCAIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVNRNGLD PITDMSKPEA
MARIRLELKE PGCDRIWYIA DAMRAGLSLD EIFKLTNIDP WFLVQIEELV QLEGVVADAG
LAGLDIDLLR KLKRKGFADA RLADVLGVNE AEVRKLRDKF DLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSTRDK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPV
IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG
GRAMEIVYDK QDLLRYFNEA VSVSNASPVL LDRFLDDAIE VDIDAVCDGE IVVIGAIMEH
IEQAGVHSGD SGCSLPPYTL SQEIQDRMRV QVGKLAMELG VVGLMNVQFA VKDNEIYMIE
VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLTSQNFTK EVIPPFYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA
AKLIELGYQI DATHGTAIIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ
AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHLR VLAK
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