| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3524 |
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| Symbol | |
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| ID | 5755338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4141608 |
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| End bp | 4142345 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641289867 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001555946 |
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| Protein GI | 160876630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTC CTGCCGCCGA TAGCCTTGCC AAAGTCGATA CTTTTATTGC GCCGCCTTGC
CTCGGGCAAA TACGCGTGCT TTATCAAGAT AGCGACATTC TGCTGATTGA TAAGCCGAGC
GGATTATTGA GTCTGTCGGG GAAGAATCCG CTCAATCTCG ATTCGGTGCA TTATCGCTTA
GTGCAGGATT TTCCGACGGC CACTTTGCTG CACAGACTTG ATTTTGGCAC TTCGGGCATT
ATGCTGGTGG CGCTGAATAA AAGCGTGAAT GGCTTGCTGA CTAAGCAGTT TCAGGCACGT
ACGGTCGAGA AGCGTTATAC TGCCTTGCTG CACGGACATA TCGCCGCTGA CAGCGGGGTG
ATTAATCTGC CGATCGCTAA AGATGTCGAT CATTTCCCAC TACAAAAGAT TTGCCACAGT
ACAGGTAAAC CTGCGATCAG CGAATATCGG GTGCTCGAGC GGTTAACCGA GCCTTTCGCC
ACGCGGGTCG AGTTTACCCC GGTTTCTGGC CGAACCCATC AACTGCGGAT CCACAGTCAG
CAATTTGGTC ACTCAATTTT GGGGTGCGAT CTCTATGGTG GCGTGGGTGA GAGTGTGGCT
GATAACGCTG ATGCACCTGA ACCAGACATC ACTAAGATGA CGAGTAACAG CAGATTAATG
CTGCATGCGA CCCGCTTAGC GTTTGATCAT CCGATCACGG GTGAGCGTAT CGACTGGCTT
TGCGAGTGTC CTTTCTAA
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| Protein sequence | MSAPAADSLA KVDTFIAPPC LGQIRVLYQD SDILLIDKPS GLLSLSGKNP LNLDSVHYRL
VQDFPTATLL HRLDFGTSGI MLVALNKSVN GLLTKQFQAR TVEKRYTALL HGHIAADSGV
INLPIAKDVD HFPLQKICHS TGKPAISEYR VLERLTEPFA TRVEFTPVSG RTHQLRIHSQ
QFGHSILGCD LYGGVGESVA DNADAPEPDI TKMTSNSRLM LHATRLAFDH PITGERIDWL
CECPF
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