Gene Sbal195_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3482 
Symbol 
ID5755295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4103735 
End bp4105312 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content42% 
IMG OID641289824 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_001555904 
Protein GI160876588 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.700235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00378927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAATCC GTGCAGATGT GCTTCGTACT TATCAGTCTA TCCATACGTG GACGGGAATA 
TTAACTGGAC TGCTATTATT CATTGCTTTT TATGCGGGTG CATTGACTAT GTTCAAACCG
CAAATTGAGC AATGGGCTAT ACCGTCAAAT CAGCAGTTAG CTCAAGTACC CAGTGAGCGG
TTGGATGAGT TAATTACGCA GGCATTGAGC CAATATGATA AAGCTAGAGA AGGTTTTATT
ATCAGCTTTG ATGAAAATGA ATCACCAATG AAGTGGTACG AACATGGCGG CGGTCGGGGT
ATTCGATTAG ATGATCAATT ACGGCATGCA AGCTTGACTG AGCGTGGCGA GATTATCACT
CAAATGAGTA GTACTAATGA GTTGGGTACG TTAATTGACC AACTGCATCG TACTGCTGGC
ATCATCGGTA AAGTGGGCCA TGAAGATTTA GGCGTGATTG TTTTAGGTGT GGCAGCCCTA
TTGTATTTTT TGGCGTTAGT GTCAGGTGTT ATTATTTTGC TGCCTACTTT AGTCAAAAAC
CTGTTCGCAC TGAGGCAAAA TAAGGGAAGT AATCGCCTTT GGCTAGACAG CCATAATCTC
GTTGGTATCA TCAGTTTGCC ATTCCACATT ATCATCGCAT GGACAGTGAT TGTTTTTGCA
TTCCACGACT TTTTTTATGG TGGGTTGGGT ATCGTTTATG GTGATAAACC TTTATTTGAA
CGGCCTGTAC GCTCAAATGT TGAATACTCA ATTACTGAAC TTCCATCAAT GGCAACGTAT
CGACAGCAAT TGAGTGCAAT GACCCATGGC TATAAAATTG TTTCTATGGC GTTTTCAAAC
CTTTCAACTA CCAATCCCGC GCTAGCTGTC GAAGTAAAAA CCGATGGGCA GATAATGCGT
GGTGGCTATA GCGATTTTAT TTATCTGAAC CCTTATACCT TTGCGGTGCA ATTTAACACA
CTTAATCAAG CCAGTGAGGG GGCGTATGGT CCTATTGTAA ACAGTTTGTT TGCTCTGCAT
TTTGGTAATT ACGCGGGTGA CTTTGGTCGC TGGATGTATT TTGCCTTTGG TTTATTAGGG
GCATTTTTGT TTTATAGTGG CAATTTACTC TGGCTAGAAA AACGTCGTAA AAAGCAAGCA
GAGCAGCAAG CATCGACACG TTTTATGGCA TCGCTGACAA TTGGTGTTTG TTTAGGGTCA
ATGTTGGGGG TGAGTTTCGC TATCTTGGTG ACTAAATGGC TTTATCTGGT AACTCATCAG
GTCAATAGTC ATTATCTTGC GTGTTACTAC GTTATATTTT TTGGGGCGAT TATTTATAGT
TTTGTTCGTA ACCCTGCGTT GGCCGCAATC CATATACTGA AGTTATTAGC ATTAGTTTGT
GCATTGATCC CTGTGAGTAC ACTCATCTCA CCGCTGTTTG CACCATCCGA GTCGATTGCT
TATGCTAGTT TGGGGCCAGT TGATATGGTG GCGTTGATTT TTGCAATATG CTTTTATTTC
TGCGCCCAGA AAGTTTATAA GCGAGCTTAT TTTGGAGAAC GAAATAGTAT TTGGGCATTG
TCGAACGCGG GCACTTAA
 
Protein sequence
MRIRADVLRT YQSIHTWTGI LTGLLLFIAF YAGALTMFKP QIEQWAIPSN QQLAQVPSER 
LDELITQALS QYDKAREGFI ISFDENESPM KWYEHGGGRG IRLDDQLRHA SLTERGEIIT
QMSSTNELGT LIDQLHRTAG IIGKVGHEDL GVIVLGVAAL LYFLALVSGV IILLPTLVKN
LFALRQNKGS NRLWLDSHNL VGIISLPFHI IIAWTVIVFA FHDFFYGGLG IVYGDKPLFE
RPVRSNVEYS ITELPSMATY RQQLSAMTHG YKIVSMAFSN LSTTNPALAV EVKTDGQIMR
GGYSDFIYLN PYTFAVQFNT LNQASEGAYG PIVNSLFALH FGNYAGDFGR WMYFAFGLLG
AFLFYSGNLL WLEKRRKKQA EQQASTRFMA SLTIGVCLGS MLGVSFAILV TKWLYLVTHQ
VNSHYLACYY VIFFGAIIYS FVRNPALAAI HILKLLALVC ALIPVSTLIS PLFAPSESIA
YASLGPVDMV ALIFAICFYF CAQKVYKRAY FGERNSIWAL SNAGT