Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3482 |
Symbol | |
ID | 5755295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4103735 |
End bp | 4105312 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641289824 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001555904 |
Protein GI | 160876588 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.700235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00378927 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAATCC GTGCAGATGT GCTTCGTACT TATCAGTCTA TCCATACGTG GACGGGAATA TTAACTGGAC TGCTATTATT CATTGCTTTT TATGCGGGTG CATTGACTAT GTTCAAACCG CAAATTGAGC AATGGGCTAT ACCGTCAAAT CAGCAGTTAG CTCAAGTACC CAGTGAGCGG TTGGATGAGT TAATTACGCA GGCATTGAGC CAATATGATA AAGCTAGAGA AGGTTTTATT ATCAGCTTTG ATGAAAATGA ATCACCAATG AAGTGGTACG AACATGGCGG CGGTCGGGGT ATTCGATTAG ATGATCAATT ACGGCATGCA AGCTTGACTG AGCGTGGCGA GATTATCACT CAAATGAGTA GTACTAATGA GTTGGGTACG TTAATTGACC AACTGCATCG TACTGCTGGC ATCATCGGTA AAGTGGGCCA TGAAGATTTA GGCGTGATTG TTTTAGGTGT GGCAGCCCTA TTGTATTTTT TGGCGTTAGT GTCAGGTGTT ATTATTTTGC TGCCTACTTT AGTCAAAAAC CTGTTCGCAC TGAGGCAAAA TAAGGGAAGT AATCGCCTTT GGCTAGACAG CCATAATCTC GTTGGTATCA TCAGTTTGCC ATTCCACATT ATCATCGCAT GGACAGTGAT TGTTTTTGCA TTCCACGACT TTTTTTATGG TGGGTTGGGT ATCGTTTATG GTGATAAACC TTTATTTGAA CGGCCTGTAC GCTCAAATGT TGAATACTCA ATTACTGAAC TTCCATCAAT GGCAACGTAT CGACAGCAAT TGAGTGCAAT GACCCATGGC TATAAAATTG TTTCTATGGC GTTTTCAAAC CTTTCAACTA CCAATCCCGC GCTAGCTGTC GAAGTAAAAA CCGATGGGCA GATAATGCGT GGTGGCTATA GCGATTTTAT TTATCTGAAC CCTTATACCT TTGCGGTGCA ATTTAACACA CTTAATCAAG CCAGTGAGGG GGCGTATGGT CCTATTGTAA ACAGTTTGTT TGCTCTGCAT TTTGGTAATT ACGCGGGTGA CTTTGGTCGC TGGATGTATT TTGCCTTTGG TTTATTAGGG GCATTTTTGT TTTATAGTGG CAATTTACTC TGGCTAGAAA AACGTCGTAA AAAGCAAGCA GAGCAGCAAG CATCGACACG TTTTATGGCA TCGCTGACAA TTGGTGTTTG TTTAGGGTCA ATGTTGGGGG TGAGTTTCGC TATCTTGGTG ACTAAATGGC TTTATCTGGT AACTCATCAG GTCAATAGTC ATTATCTTGC GTGTTACTAC GTTATATTTT TTGGGGCGAT TATTTATAGT TTTGTTCGTA ACCCTGCGTT GGCCGCAATC CATATACTGA AGTTATTAGC ATTAGTTTGT GCATTGATCC CTGTGAGTAC ACTCATCTCA CCGCTGTTTG CACCATCCGA GTCGATTGCT TATGCTAGTT TGGGGCCAGT TGATATGGTG GCGTTGATTT TTGCAATATG CTTTTATTTC TGCGCCCAGA AAGTTTATAA GCGAGCTTAT TTTGGAGAAC GAAATAGTAT TTGGGCATTG TCGAACGCGG GCACTTAA
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Protein sequence | MRIRADVLRT YQSIHTWTGI LTGLLLFIAF YAGALTMFKP QIEQWAIPSN QQLAQVPSER LDELITQALS QYDKAREGFI ISFDENESPM KWYEHGGGRG IRLDDQLRHA SLTERGEIIT QMSSTNELGT LIDQLHRTAG IIGKVGHEDL GVIVLGVAAL LYFLALVSGV IILLPTLVKN LFALRQNKGS NRLWLDSHNL VGIISLPFHI IIAWTVIVFA FHDFFYGGLG IVYGDKPLFE RPVRSNVEYS ITELPSMATY RQQLSAMTHG YKIVSMAFSN LSTTNPALAV EVKTDGQIMR GGYSDFIYLN PYTFAVQFNT LNQASEGAYG PIVNSLFALH FGNYAGDFGR WMYFAFGLLG AFLFYSGNLL WLEKRRKKQA EQQASTRFMA SLTIGVCLGS MLGVSFAILV TKWLYLVTHQ VNSHYLACYY VIFFGAIIYS FVRNPALAAI HILKLLALVC ALIPVSTLIS PLFAPSESIA YASLGPVDMV ALIFAICFYF CAQKVYKRAY FGERNSIWAL SNAGT
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