Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3479 |
Symbol | |
ID | 5755292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4100950 |
End bp | 4102212 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641289821 |
Product | HipA domain-containing protein |
Protein accession | YP_001555901 |
Protein GI | 160876585 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00282724 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACCTG CTGAATCAGT AGAGGCTCTC GCGCTTTATT TAAATCATCA ACGGATTGCG ATACTCACCC ATTATTCAGG TGGTAAAAAC ATTCTGAAAT TTGACCCTGA ATATATCGCG ATGCCAAAAG CACTTCGACC AACATTAACG CTCACCCAAC TGCTAGACCC CCACTACATC GATAAAATAC AAGTCAGAAC ACAAAGATTA TCACCGGTGC TGTCTAACTT GCTCCCCGAG GGCGCATTGC GGCATTGGAT GTCAGCCGCG CTAAAAGTAC ATGAGAACAA CGAATTTCCC ATATTGGCGT GGGCAGGGAA CAATCTTCCC GGCGGCTTAA TCGCATCAGC CATAGCAAAA GAAGATATTC CAGCTTGGGC ACTATCGCCA CGGGAAAGAA CAGAAGCCAT CGTAATCGAC ATCACCCACA CCAGTAATAA ATTCTCACTT GCCGGTGTTC AAATGAAATT CTCGACAAGC AGAAACGATG GACGATTCAA CATAAATGCC GATCAAGATG GCCAAGATAG TTGGATTATC AAGACGCCTT CAACAGTACA CCGCAACGTC CCACAAAATG AATACACTGC AATGAAGTTG GCACAAATAA TCGGAGTGAA CATCCCTGAA ATTGAGCTCA TCTCGCTTAA TGCATTGGAT AATTTACCCA ACATCAAACT CCCAGATGAA CCAACGGCTT ATGCAATTAA ACGCTTTGAC CGCAGTGATA CGGGCCGCAT TCATGCAGAG GACTTTGCCC AAATATTCGA AGTTTACGCC CATGATAAAT ACGGTAAATA CAACTACGAA GCCATAGCGA AAGCTCTATA CATGAGCAGC TACAATGGAC TAAAAGACGT GCAGCAAATG GCAAGGCGAT TGCTGGCCAA TATCTTGCTC GCCAACGGTG ATGCCCACTT AAAAAATTGG AGTGTTATCT ACCCAGATAA CCAAAATGCG ATACTCTCAC CCGCTTACGA TATTGTGAGC ACCTTACCCT ACATAGAAGG CGAAACCGCC ATTGCTCTCA ACATAAATAA ACAAAAACTA TGGTACGCCA TTGATATCAC TACCTTCCAA GCATGGGCAA CGAGAACAGG CATACCATGG CCCGCGATAA AGGTTCATTT ACTGGATGCC ATGCAAAAAG CCCGTACTCT TTGGCCAGAG GCACTTGCTG AACTCCCCAT GCATGAAGTG CATAAAACGA TATTAAAAGC TCACTGGGCC AAACTACATA ACGACTTTAA AATCCTCTGC TAG
|
Protein sequence | MKPAESVEAL ALYLNHQRIA ILTHYSGGKN ILKFDPEYIA MPKALRPTLT LTQLLDPHYI DKIQVRTQRL SPVLSNLLPE GALRHWMSAA LKVHENNEFP ILAWAGNNLP GGLIASAIAK EDIPAWALSP RERTEAIVID ITHTSNKFSL AGVQMKFSTS RNDGRFNINA DQDGQDSWII KTPSTVHRNV PQNEYTAMKL AQIIGVNIPE IELISLNALD NLPNIKLPDE PTAYAIKRFD RSDTGRIHAE DFAQIFEVYA HDKYGKYNYE AIAKALYMSS YNGLKDVQQM ARRLLANILL ANGDAHLKNW SVIYPDNQNA ILSPAYDIVS TLPYIEGETA IALNINKQKL WYAIDITTFQ AWATRTGIPW PAIKVHLLDA MQKARTLWPE ALAELPMHEV HKTILKAHWA KLHNDFKILC
|
| |