| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3474 |
|---|
| Symbol | |
|---|
| ID | 5755287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4095403 |
|---|
| End bp | 4096980 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641289816 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001555896 |
|---|
| Protein GI | 160876580 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0115046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC GTCCCCAAGA TTACGCCGCC ATAAAACACT TAATACCTGT TGCCTGCGGT
TGGGCTGTGG CGGCCATATT GGAAGCGGCA TGCTACATTC AACTGGCTTT AGCCATTATT
GAGCAGCAAT CACCACAAAT AGTGCTATTC ATTGCCGCGA TAACCATACT CACCACAATA
CTGGCTTCGC GTTCTGGTTT TTGGGCTGGC GCAAGGCTAG CTAATGCGCT CTACAGTGCC
CTAGGCGCGA CTATGCAACA AGCTAAGCTC TCTTGGTTTA CAGCCAGTGT CAGGACACTA
CTCATAGAAA CCGTCTCTCG GAGTATTCCT GGCTTTATGA GTATTCCGGC ACATCAATTT
CAGGTCTTTA TTCATGCACC GCTTATTCCG CTCTGCATTA CTTTCGGCAT CGGATTGATC
GGTGGCATAC CACTGGTAAT GATGTTGGCT AGCTTGTTGC TCATATCATT TGTGATTCAG
AGTATGGCGC AACGGGCCCT TGCCCGCGCA GATATGGACC GAAACAACGC TGAACTGGCA
ACGAATCAAT CCACTCTTGA ACTTATAGAT CACGTAGAAT TACTCCGTAC AGCAGCGGGA
TACAATCGTG CGACCGAGCG TTTAGAGCAA AACTGGCAGG CGCAAGAAAT CGCACTGGAT
CGAACTAATC GCGCCGCCGC TATAGCAACA TTACTGTCGG CTATCGCCAG CTTTTTACCT
ATTGCCGGCA TGGCTCTCTA TCTCGTGTTA TCAGGCGTAA ACAATTCGAC AATGCTGCTC
GCTGTCTTGA TGTTGACCAT GCGCGCTTCA GCGCCACTTG AGACTTTCGC CGTGACGGCA
ATAGGCATTA ATGATCAGTT CGCGGCTATT AAACACTATC GACAAGCGAC TCATGCGCCA
ACGCTCAAAG AGCCAAGCCA AGCACAACAA AAGACACCGC ACAATCATAC AATCGAACTG
AATAACGTAA CATTTCCCCC TGCGGTGCAA AATATCAATG CCACTATCGA ACCAGGTGAA
CGCGTACTGA TTTGCGGCCC GAGCGGTTCA GGAAAAACAA CCTTACTTAA GCTATTGATG
CGCTTTGATG ATCCCACCTT AGGTCTGATT ACTTTGGGCA AGGTACCACT CACTTCAATC
CCTGCTGCTG AACTTGCCCG CTTTTTCGCC TATGTGCCGC AGGATCCACT CATCTTTACA
GGTACCATTG CCAGTAATAT TCGTATTGGT AACCCTGATG CCGACGATCA AGCCGTAGAT
AAAATTGCAC GCCAAATGGC ACTGGATGAA GTATTAGACA GATCAGCACT GGGCATTTAC
CAAGAAGTCG GATTGCAAGG TGCAGGATTA TCGGGAGGAG AACGCCAAAG GCTTGCCTTA
GCACGCGCGC TTATCAAAAA TGCATCGATT CTGATAATGG ATGAGGCCAC CTCGGCATTG
GATGAAGAGA CGGAAAAGCG CGTTGCCAAA GCTATTTGCG AACAAAGCTG CACACTGGTT
ATCGTTTCGC ACCGAAACCA ATCAGTTTGG CAGCCAACTC ACATCTTCGA ATTTGATCAA
CCGCTTGCCT TAAAGTAA
|
|---|
| Protein sequence | MINRPQDYAA IKHLIPVACG WAVAAILEAA CYIQLALAII EQQSPQIVLF IAAITILTTI
LASRSGFWAG ARLANALYSA LGATMQQAKL SWFTASVRTL LIETVSRSIP GFMSIPAHQF
QVFIHAPLIP LCITFGIGLI GGIPLVMMLA SLLLISFVIQ SMAQRALARA DMDRNNAELA
TNQSTLELID HVELLRTAAG YNRATERLEQ NWQAQEIALD RTNRAAAIAT LLSAIASFLP
IAGMALYLVL SGVNNSTMLL AVLMLTMRAS APLETFAVTA IGINDQFAAI KHYRQATHAP
TLKEPSQAQQ KTPHNHTIEL NNVTFPPAVQ NINATIEPGE RVLICGPSGS GKTTLLKLLM
RFDDPTLGLI TLGKVPLTSI PAAELARFFA YVPQDPLIFT GTIASNIRIG NPDADDQAVD
KIARQMALDE VLDRSALGIY QEVGLQGAGL SGGERQRLAL ARALIKNASI LIMDEATSAL
DEETEKRVAK AICEQSCTLV IVSHRNQSVW QPTHIFEFDQ PLALK
|
|---|
| |