Gene Sbal195_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3473 
Symbol 
ID5755286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4093808 
End bp4095406 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content48% 
IMG OID641289815 
ProductABC transporter related 
Protein accessionYP_001555895 
Protein GI160876579 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0115925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTAC TTTTCAGCCC CCATTCAAAA CTAGCTTTGG CCTTACGTCC GGCGATTCCC 
GCACTCACTA TCGGAACATT ACTAGCGGCT GGTACCGGCG TGATGGCACT AAGCGCACTC
TGGTGCGTAA TACAGCTTAT TGCTGGGTAT CATTCATTTT GGTTAGCGGG TGCGCTCATA
TTTTGGATAT TGTCGGCACT GCTTTCTGGT AGCGCCTCTT GGATTAATCA CAATGCTGAG
GCGCAATTTT CTGGAAGATT AAAGCGTGAT GTTGCAGCGC ATCTTGTTAG GCTGCCACCA
AGTACTTTGG CAAAATATAA GGGCGAAAAG TTAAAGCGAT TAATGGTCGA TGACATAGCG
TCATTGCATC ATATGATCGC GCATTTACCC TCAGAATTAG CGACCTTTAT CATTGTCCCT
GCCATTACTA TCGGTTTGCT GATCTTAAGC ACGGGCCTAG TATCATTACT TGCCCTTATC
CCAGGCCTCG TCGCCGCGCT TTTCTATTTG GTGGTAGTCC CAAGGCTTGC TGCAAAACAG
GGTGAAGCAC GAGTTAATGT GATGGGAAAT ATCACAGCTG CAGTGGATGA TTACTCGCGT
GGTGCACCAG TATTTAGAAT TTATGGCGAT CAAACTGGCG CAATAGCCGA CTACCAAAAG
GCAACTAAGC ATTTTATTGA GGAGATCATT GAGCGGGTAA GCAAGGTATC CACTTCAGTC
GCAGTGGCCA CATCACTACT ACAGGCTGTT TGCACTTTTG CGATTGTCTA TGCCATCGGG
TATGAATGGC CCCCAGAAAA GCTTGCTGCA GCCTTGTTCT TCAGTCTGGC CATTGTCACG
CCAGCCCTAA AGCTCGGGCA TGGGCTTGAT TATCTTGCCA CGGGCCGCGC TGCAGCTAAG
CGACTAACAG ATTTTCTTGA GCAGTCGAGA GTCCCTGTTG GTAGCGGTAA TATTGAGCTT
AATACACCTA TGCCGCTCAC TCTCACCGAT GTCGTGCCTT CACTGTCTAC AAGCAGTAAA
ACAGTGCCCA TTAACTATCA ATTTAGATCT GGCAGAATCA CGGCAGTGAC AGGGATCAGT
GGTGTTGGCA AATCCACATT ACTGCGCTTA TTAGCTGGCA TGGAGCCACT ACATGCCGGA
GATATTCGAC TCGCTGGTAT TGCACTCAAT AAGTTGGATG AAGCCTCAAT TAATCGCGCG
ATCATGCTAT TACCGCAAAG TGCGGGACTA CTGGCAACCT CCATCGCCGG CAATCTCGCG
CTCACCGCAC CTGATGCCAC GGATGAAGAT TACTTAGTGG CATTACACTG CGCACAATTG
GATAAATCCT TAACTACTCA TGCAAGCACC TTGTCTGGTG GCGAAATACA ACGGGTTAAT
CTTGCCCGTG TGTTTCTTAC TCCCGCTCGC GTGATATTGC TTGATGAACC CACATCGGCC
CTAGACAGCG AAACGGCATT TAACGTGTTC AAAGCGCTAA GCCATCACGC AAAAACAAAC
CACAAAACGA TCGTGATGAT TACCCATGAC TTAACGCTTT CTGAGCTGGC GGATGACAAG
CTCGCACTAA AGCATCACAG GGAAGGAGAA GGCCAATGA
 
Protein sequence
MQLLFSPHSK LALALRPAIP ALTIGTLLAA GTGVMALSAL WCVIQLIAGY HSFWLAGALI 
FWILSALLSG SASWINHNAE AQFSGRLKRD VAAHLVRLPP STLAKYKGEK LKRLMVDDIA
SLHHMIAHLP SELATFIIVP AITIGLLILS TGLVSLLALI PGLVAALFYL VVVPRLAAKQ
GEARVNVMGN ITAAVDDYSR GAPVFRIYGD QTGAIADYQK ATKHFIEEII ERVSKVSTSV
AVATSLLQAV CTFAIVYAIG YEWPPEKLAA ALFFSLAIVT PALKLGHGLD YLATGRAAAK
RLTDFLEQSR VPVGSGNIEL NTPMPLTLTD VVPSLSTSSK TVPINYQFRS GRITAVTGIS
GVGKSTLLRL LAGMEPLHAG DIRLAGIALN KLDEASINRA IMLLPQSAGL LATSIAGNLA
LTAPDATDED YLVALHCAQL DKSLTTHAST LSGGEIQRVN LARVFLTPAR VILLDEPTSA
LDSETAFNVF KALSHHAKTN HKTIVMITHD LTLSELADDK LALKHHREGE GQ