Gene Sbal195_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3472 
Symbol 
ID5755285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4091371 
End bp4093488 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content45% 
IMG OID641289814 
ProductTonB-dependent receptor 
Protein accessionYP_001555894 
Protein GI160876578 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0143409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAT TTGGTAAGTT TTACCCACAA TCAAAGTGGG TTATCGGTTC TCTTGCGCTG 
GGGCTTAGCG CTATTTCAGG CTCAACTATT GCTGACAGTG GAACTGCTCC AGATAAGCAA
TCCAAGCAAC AAGATGCAGC GGGAAATATT GAAGTCATCA CAGTTTACGG CCAGAAAATC
GAGCGAACGT TGAAAGAAAC TGCGAGTTCA GTGACGGTCA TTACTGAAGA ACAGTTGAGG
AAAAATGCGG ACCAATCAAC GATTTCAGAA ATTCTCGGCG GTACACCAAA TTTAATTTAT
GCCGGAAATA CCGATGCGCC CATTATCCGC GGCACGGATA CCAAAGGGCC TGTAGCAGCG
GGTAATGCCT ATTTATCTAA GCCTGTACCC GGAGCAACTA TCAGTGTTGA TGGTAAATAT
CTGAGCCCCG CAGAACTGGA TTTAGGCGCC GCAGGCGTGT GGGATGTGTC GTCTATTGAA
GTCTATCGTG GTCCGCAAAC GACCAGTCAA GGAGCCAACA GTATTGCTGG CGCCGTAGTC
ATTCATACCC ATAACCCCAC TTATACGCCA GAATTTGCAG CGCAAGCACT TTATGGCAGT
CGGAATAAGA AGCGCTTTTC GGTCATGGCG TCCGGTGCGC TAAGCAATGA CTTTGCCGCA
AGAATTAGCG CAGATTACAG CGCTAGAGAT ACCTTTGTTG ATTACGTTAA TCCAGAATTT
ACTGCCCATG ATTTGGATTT TGAGTTTAAA AACCAAAATC TACGGGCGAA GTTGCTATGG
GAACCAGAAA AATACAGTAA CTTTTCCGCC ATGCTGACTT ATTCCTCCAC TGAGGCTAAA
CGTCCCAGAA ATGAGGTGGT ATCAGAACCC TATGATGACT TAGAAAATCG TTCAATTTTT
CAGGACAATC AAGAAGTCAG TAATCATGTC GGGATTTTTG ATCTTGAATA TGTGTTCGAC
AATGGTATGA AGTTGCATAA CCAACTGCAG TACTCAGAAG GGCAGTTTGA TTATCGATTT
GCAGCACCTT ATCAAGGGAT CGCAAAACGA GATAATGAAA ACTTTTCGAA TGATATAAGG
CTGAACTTTG GTGACAAGAG TTCAGAGTTT AGTGGGGTTG CCGGTGTCTT CTACTGGGAC
GATAAAACGA ATAACAAGTT GAACAACGTA TTTGGTAATG CCGACGCCGA TCTGAGGCAT
ACCAGTTTTG CCCCCTACGG TGAAGTGATA TGGCGCTTCT CACCTAAGTG GGCATTCACC
AGCGCACTTC GTTATCAGTC TGATGAAATT AGCCACGATG GTATTGCCAG CTACATCCCA
GGTGTGCGCC ATCAATATGA AGAGACGTTT ACGGCGTTAT TACCTAAGGT TGCCCTGTCC
TATGATCTGA CTGATAACGT CCTAATCGGC GCTATGATCA GTGAAGGCAA TATTCCTGGT
GGTACAGGCA TTAACTTCCG CGGTGGCGAA TATTATACAT TCGATGCCGA GTCAGCATGG
AACTATGAAC TTTTTACCCG TATCGATCTG CTTGAACAAC GCTTGATCAT AAATAGCAAT
CTCTTTTACA CCCGCTTTAA TGATTCACAA CGTTCAGTTA CTGACTACCT AGATGGACGA
CCCTTTGGTT CTGTCATTAT TAATGCTGAT GAAGCACAAA GCTATGGGAT TGAATTAGAT
TGGAACTTTA AAGTTGCCGA TAGTTTTAGC TTATATGGTG GGCTGGGTTT ACTTGAAACT
GAGATAAGTG AATTTAATGA CTACCGTGGC GAGGAGTTTG TCGGCAACGA GTTTAGTAAA
GCGCCAGGAT ATATGTTCAA TCTTGGGTTT GACTATGCGA TCACAGACGC CTTTAAAGTG
AGCGGTGATG TGCGTCATAC GGATGGATAC TTTTCAACGG ATACCAATGA GCCTGAGTTA
AGAGTGGGGT CTTACACAAC GGTAAACCTG AATTCTTCCT ATCAAATCAA TCAATATTTT
GAAGCCTTTG TTTATGCACG CAATTTACTG GATGAACGTG CTCCTGTGGC AAAAATGGCT
GACAGAAGTA CCGGAGGCGT GGATGCATAT TTACTTGAAC CACGAGAAAT AGGCGTGGGC
GTTAGGGCGA AGTTTTAG
 
Protein sequence
MPRFGKFYPQ SKWVIGSLAL GLSAISGSTI ADSGTAPDKQ SKQQDAAGNI EVITVYGQKI 
ERTLKETASS VTVITEEQLR KNADQSTISE ILGGTPNLIY AGNTDAPIIR GTDTKGPVAA
GNAYLSKPVP GATISVDGKY LSPAELDLGA AGVWDVSSIE VYRGPQTTSQ GANSIAGAVV
IHTHNPTYTP EFAAQALYGS RNKKRFSVMA SGALSNDFAA RISADYSARD TFVDYVNPEF
TAHDLDFEFK NQNLRAKLLW EPEKYSNFSA MLTYSSTEAK RPRNEVVSEP YDDLENRSIF
QDNQEVSNHV GIFDLEYVFD NGMKLHNQLQ YSEGQFDYRF AAPYQGIAKR DNENFSNDIR
LNFGDKSSEF SGVAGVFYWD DKTNNKLNNV FGNADADLRH TSFAPYGEVI WRFSPKWAFT
SALRYQSDEI SHDGIASYIP GVRHQYEETF TALLPKVALS YDLTDNVLIG AMISEGNIPG
GTGINFRGGE YYTFDAESAW NYELFTRIDL LEQRLIINSN LFYTRFNDSQ RSVTDYLDGR
PFGSVIINAD EAQSYGIELD WNFKVADSFS LYGGLGLLET EISEFNDYRG EEFVGNEFSK
APGYMFNLGF DYAITDAFKV SGDVRHTDGY FSTDTNEPEL RVGSYTTVNL NSSYQINQYF
EAFVYARNLL DERAPVAKMA DRSTGGVDAY LLEPREIGVG VRAKF