Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3433 |
Symbol | |
ID | 5755239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4051093 |
End bp | 4051689 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289768 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001555855 |
Protein GI | 160876539 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.527066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000475318 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAATTAA GAGTCAGTAA GTCGTCTTTG TCCTTTGCTC GAATTATCCA TGTTTATGTG TCTATGGCGT TGTTGCTGCT GATGCTGTTT TTTGCGGTGA CAGGCATAAC GTTAAATCAC CCTAATTGGT TTTCTCAAGC CGATCAGGAA CCTAAACGGG AGCAAGTGCC CATCCCTGCC TATTTATTAC CCGTTGATAC ACAAGATGCC CAGTGGCGCT TGGCAACGGG CCATTGGCTG AAAAGTGAAT GGGCGATGGA TATGGCCACT GCTGACATAG ATGAAGACGA AATTAGCTTA GTCAGCAAAG GGCCTGGCAC TTACCGCAGC CTGACGTTGG ACCTGCTCGA CGGCCAAGCC TATGTCGAAA CCTTAGAGTA CGGTGTCGTA GCCGTAGTGA ATGATTTGCA TAAGGGCCGT AACACAGGCA CTGCATGGGC TTGGATACTC GATCTTAGCG CCGTGCTGAT TATTTTATTT TCGCTTACTG GGGCTTACTT ATTATTGCCT CAAACCAAGC GCCTCAAAAA GTCATTGTTA TACATGGTAC TTGTCAGCGG TAGTTGCGGA CTTGTGTATG TTTATTTCGT TCCATAA
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Protein sequence | MKLRVSKSSL SFARIIHVYV SMALLLLMLF FAVTGITLNH PNWFSQADQE PKREQVPIPA YLLPVDTQDA QWRLATGHWL KSEWAMDMAT ADIDEDEISL VSKGPGTYRS LTLDLLDGQA YVETLEYGVV AVVNDLHKGR NTGTAWAWIL DLSAVLIILF SLTGAYLLLP QTKRLKKSLL YMVLVSGSCG LVYVYFVP
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