| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3427 |
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| Symbol | secF |
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| ID | 5755233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4044853 |
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| End bp | 4045755 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641289762 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001555849 |
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| Protein GI | 160876533 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000133978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000105765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAATA TCAATCTAAC AAAATGGCGT TATGTCTCAA GTGCTATCTC AATTTTATTG
ATGATAACGT CATTAGCCAT CATAGGTGTA AAGGGTTTTA ACTGGGGATT AGACTTTACC
GGTGGTGTGG TGACTGAAGT TCAGCTCGAT AGAAAAATCA CCAGCAGTGA GTTACAACCT
TTGCTTAACG CTGCCTATCA GCAGGAAGTC TCTGTGATCT TGGCCAGTGA GCCGGGCCGT
TGGGTATTAC GCTATGGTGA TATAAAGAGT GCTGATACTG AGCAAAGCAA TGTCGATATT
CAGCAGGCAT TAGCGCCACT TAACTCTGAA GTGCAAGTCC TTAACAGCAG CGTTGTTGGG
CCGCAGATTG GTCAAGAACT GGCGGAGCAG GGCGGGTTAG CGCTGTTAGT CGCTATGCTG
TGTATTTTAG GCTATTTAAG TTATCGCTTC GAGTGGCGAC TCGCATCGGG TGCTTTGTTT
GCGCTAGTGC ACGACGTCGT CTTCGTACTG GCGTTTTTTG CGCTGACGCA GATGGAGTTT
AATTTAACGG TACTGGCGGC TGTGCTGGCG ATTTTAGGCT ATTCGTTAAA TGACTCGATT
ATCATTGCTG ACCGTATCCG TGAATTATTG ATTGCTAAGC CAAAGCTTGC AATTCAAGAA
ATTAATAACC AAGCGATTGT GGCGACATTC TCCCGTACTA TGGTGACGTC AGGGACAACC
TTAATGACGG TCGGTGCGCT GTGGATCATG GGCGGTGGGC CGCTGGAAGG ATTCTCGATT
GCGATGTTTA TCGGTATTTT AACCGGTACA TTCTCATCGA TTTCTGTTGG CACCTCATTG
CCTGAGTTGT TAGGTTTAAC GCCTGAGCAT TATAAGGAAC AAGTGATTTC TGATACGCCT
TAG
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| Protein sequence | MKNINLTKWR YVSSAISILL MITSLAIIGV KGFNWGLDFT GGVVTEVQLD RKITSSELQP
LLNAAYQQEV SVILASEPGR WVLRYGDIKS ADTEQSNVDI QQALAPLNSE VQVLNSSVVG
PQIGQELAEQ GGLALLVAML CILGYLSYRF EWRLASGALF ALVHDVVFVL AFFALTQMEF
NLTVLAAVLA ILGYSLNDSI IIADRIRELL IAKPKLAIQE INNQAIVATF SRTMVTSGTT
LMTVGALWIM GGGPLEGFSI AMFIGILTGT FSSISVGTSL PELLGLTPEH YKEQVISDTP
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