| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3415 |
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| Symbol | truB |
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| ID | 5755219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4031127 |
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| End bp | 4032092 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641289748 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001555837 |
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| Protein GI | 160876521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.630967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000684703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGTC GTCCAAAAGG TCGTTTTATT GATGGGATAG TGCTGCTGGA TAAATCCACT
GGCATGAGTT CTAACTTTGC ATTGCAAAGG GTAAAGCGCT TTTTTAATGC GAACAAAGCA
GGGCATACGG GCGCACTCGA TCCGTTAGCG ACAGGTATGT TACCTGTGTG CTTAGGCGAA
GGGACTAAGT TTTCCCAGCA TCTGTTAGAT GCCGATAAAC GTTATTTGGT CACCGCAAAG
CTGGGCGAGC GAACGGATAC CAGTGATTCC GATGGCGAAG TGGTGCAAAC CCGCGCCATT
GATTTTACTG AGGCGCAGTT ATTAACCGCG CTTGATTTCT TCCGTGGTGA GACTCAGCAA
GTGCCTTCTA TGTATTCCGC GCTTAAATAT CAGGGCCAGC CCCTGTATAA ATATGCCCGT
GAAGGCATTG AAGTGCCGCG CGAATCTCGC CCTATTACGG TATTTGAGCT TAATTTTATC
GGTCTTGAAG GCGATGAGCT GACCTTAGAC ATTCATTGTT CTAAGGGCAC TTATATTCGC
ACTATCATAG ACGATCTCGG TGAAATGCTC GGTTGCGGCG CCCATGTCAT CATGTTGCGT
CGCACTCAAG TTGCACAATA TCCCTATGCA AGAATGGTTT CCTTAGAACA ACTTGAAGCG
CTTGTTGCTC AAGCACATGA ACAACAGATA GATCCGAGCG TCTTACTTGA TCCGCTGTTA
TTACCTATGG ATACGGCTGT GGCTGATTTC CCTGAGGTGA ATGTGCCAGA TGCAATCGCC
CCTTACTTAA TGCAAGGTCA GGCTGTTCGG GTCCCCGTTA ATGCAGACTT GAAAACCGAT
GAACTGGTGC GTATCACTTT AGGTGACATT CGCCGATTTG TGGGGATTGG CACTATGAAC
GAAGACGGCC TACTCGCGCC GAAACGACTC ATAGTGATCC ATGACGAGCC TGCAGAAACT
GATTAG
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| Protein sequence | MARRPKGRFI DGIVLLDKST GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPVCLGE
GTKFSQHLLD ADKRYLVTAK LGERTDTSDS DGEVVQTRAI DFTEAQLLTA LDFFRGETQQ
VPSMYSALKY QGQPLYKYAR EGIEVPRESR PITVFELNFI GLEGDELTLD IHCSKGTYIR
TIIDDLGEML GCGAHVIMLR RTQVAQYPYA RMVSLEQLEA LVAQAHEQQI DPSVLLDPLL
LPMDTAVADF PEVNVPDAIA PYLMQGQAVR VPVNADLKTD ELVRITLGDI RRFVGIGTMN
EDGLLAPKRL IVIHDEPAET D
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