Gene Sbal195_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3412 
Symbol 
ID5755216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4026186 
End bp4028288 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content46% 
IMG OID641289745 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_001555834 
Protein GI160876518 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000844924 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000972679 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATCCTA TTGTAAAGAG TTTTGAGTAT GGTCAACATA CAGTCACCCT GGAAACAGGT 
GTTATAGCGC GTCAAGCAGA TGCAGCCGTT TTAGCGAGTA TGGGTGACAC GACTGTGTTG
GTCACTGTTG TCGGTAAAAA AGAAGCAGAT GCTGGTCGTG ACTTTTTCCC TCTGACTGTT
AACTATCAAG AAAAAACCTA CGCAGCAGGT AAAATTCCTG GTGGTTTCTT TAAGCGTGAA
GGCCGTCCTT CAGAAGATGA GACATTAATC GCTCGTCTGA TCGACCGTCC AATTCGCCCT
CTTTTCCCTA ATGGTTTCAA AAACGAAGTT CAAGTTATCA TTACTGTAGT ATCTGTCGAT
CCACAAATCG AGCCAGATAT CATCTCTATG ATCGGTACTT CTGCGGCACT GGCTATTTCT
GGTATTCCAT TCAGCGGTCC TTTAGGTGCT GCACGTGTGG GTTACATTGA TGGCGAATAC
GTGTTGAACC CAAGTGTTGC GCAACTTGCA ACCAGCCAAC TGAACTTAGT GGTTGCTGGT
ACTGCTGGTG CAGTATTAAT GGTGGAATCA GAAGCCCAAG CATTGCCAGA AGAAGTGATG
TTAGGTTCTG TTGTTTACGG TCACGATCAA CAACAAGTGG TTATCAAAGC GATTGCTGAA
TTTAAAGCAG AAGCCGGTAA ACCAACTTGG GATTGGACTG CACCAACGCA AGATGCCGAT
TTAGTTGCCC AAATCAAAGA GCTTGCTGAA GCTGGTTTAG GCGATGCATA TAAAATCCAA
GTTAAACAAG ATCGTTATGC TCAAGTTTCT GTTGTTAAAG CAGCAACAAA AGAAGCCTTG
TTAGCCAGCA ATCCAAGCAT TGATTTACGT GAAGTAGACA ACTTGCTGGG TAGCTTAGAG
AAGAAAGTGG TTCGTGGTCG CATCATCCGT GGTGAGCCAC GTATCGATGG TCGTGAACCA
GACATGATCC GTGCATTGAG CGTGTTAGCG GGCGTATTGC CACGTACTCA CGGTAGTGCA
TTGTTCACTC GCGGCGAAAC TCAAGCGTTA GTGACTTGTA CTTTAGGTAC TGAACGTGAT
GCACAGAAGA TTGACAGCAT CATGGGCGAG CGCACTAACC GTTTCATGCT GCACTATAAC
TTCCCTCCAT ACTCTGTTGG TGAAACAGGC ATGGTGGGTT CACCTAAGCG CCGCGAAATC
GGTCATGGTA AGTTAGCATG GCGCGGTATC AATGCTGTTA TGCCTTCTGC TGCTGAATTC
CCATACAGCG TGCGCGTTGT ATCTGAAATC ACTGAATCTA ACGGTTCAAG CTCTATGGCG
TCAGTATGTG GTACTTCATT AGCTCTGATG GATGCTGGTG TGCCTATCAA AACTTCTGTA
GCGGGTATCG CTATGGGTCT AGTGAAAGAA GGCGATGATT TCGTTGTTCT TTCTGACATC
TTAGGTGATG AAGATCATTT AGGTGATATG GACTTTAAAG TTGCGGGTAC GCGTGATGGT
ATTACTGCAC TGCAGATGGA TATCAAGATC GAAGGTATCA CTAAAGAAAT CATGGATATC
GCACTGCAAC AAGCCTATGG CGCACGTGTA CATATCCTGA ACGTGATGGA TCAAGCGATT
GGTTCACACC GTGATGATAT TTCTGACCAC GCTCCACGTA TCACTGTTAT CAAGATCAAC
CCAGAAAAAA TTCGTGACGT TATCGGTAAA GGCGGCGCAG TTATCCGTGC TCTTACTGAA
GAAACCGGCA CTACGATTGA ACTGGAAGAT GACGGTACTG TGAAGATCGC TTCTTCAAAC
GGCGAAGCAA CCAAAGAAGC TATCCGTCGT ATCGAAGAAA TCACTTCAGA AGTTGAAGTG
GGTCGTATCT ACAACGGTAA AGTTATCCGT ATCGTTGATT TCGGTGCGTT CGTGAACATT
CTGCCGGGCA AAGACGGTTT AGTACACATT TCACAAATCA GTGATGAGCG TGTTGCTAAC
GTGTCTGATC ACCTTGAACT GAACCAAGAA GTTGCTGTTA AAGTAATGGA AGTGGATCGT
CAAGGCCGCG TACGTCTGTC AATTAAAGAA GCACAAACTA AAGAAACTGC CGCTGCTGAA
TAA
 
Protein sequence
MNPIVKSFEY GQHTVTLETG VIARQADAAV LASMGDTTVL VTVVGKKEAD AGRDFFPLTV 
NYQEKTYAAG KIPGGFFKRE GRPSEDETLI ARLIDRPIRP LFPNGFKNEV QVIITVVSVD
PQIEPDIISM IGTSAALAIS GIPFSGPLGA ARVGYIDGEY VLNPSVAQLA TSQLNLVVAG
TAGAVLMVES EAQALPEEVM LGSVVYGHDQ QQVVIKAIAE FKAEAGKPTW DWTAPTQDAD
LVAQIKELAE AGLGDAYKIQ VKQDRYAQVS VVKAATKEAL LASNPSIDLR EVDNLLGSLE
KKVVRGRIIR GEPRIDGREP DMIRALSVLA GVLPRTHGSA LFTRGETQAL VTCTLGTERD
AQKIDSIMGE RTNRFMLHYN FPPYSVGETG MVGSPKRREI GHGKLAWRGI NAVMPSAAEF
PYSVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPIKTSV AGIAMGLVKE GDDFVVLSDI
LGDEDHLGDM DFKVAGTRDG ITALQMDIKI EGITKEIMDI ALQQAYGARV HILNVMDQAI
GSHRDDISDH APRITVIKIN PEKIRDVIGK GGAVIRALTE ETGTTIELED DGTVKIASSN
GEATKEAIRR IEEITSEVEV GRIYNGKVIR IVDFGAFVNI LPGKDGLVHI SQISDERVAN
VSDHLELNQE VAVKVMEVDR QGRVRLSIKE AQTKETAAAE