| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3385 |
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| Symbol | |
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| ID | 5755189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4006040 |
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| End bp | 4008121 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641289718 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001555807 |
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| Protein GI | 160876491 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00475521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTACGAA CATCGACACA TTGGCTTCTG GATGCTCTGC TAAGCTCAAA ACCTGAGCTT
GTGCTACCAG ATAAATATAA TCTTTCAATG GATACTCGTG AAGCTTGGCA TCAATTACAA
GAAACACTAA GGTTACCTGC TAGCGCAATT TCTGAGGCTC TTTCTTTAGC CTATTCTACA
GATGGTATTA ACATACAAGA ATTTAAGCCT CCCAGAGATA ACCCTTTTAA TGAAAGAGTT
TGTCGCGAGA TAGGCATATT GCCCTTTGAT TTGAGTGTTA ATGAGCCTGT TATTGCAACT
TATGACCCTC GTCTAACTCC AGAGCAGCAT GAACAAATAC GTTTTATTCT GAGACGTGAC
TTTAAACTGG CTATTTTGTC TCCTGATGAA ATTGATATAG GGATTACACG ACTTTTTTCG
ACAATTGATC ACGATTATAG AACTATCGAT CTGACTTCTG CGTCAGTTGA GGAAAATGAA
ACTTCTCAGT TAGCAAAAGC GATCTTACGC TCAGCTATAG ATAAAAGAGC GTCGGATATT
CATATGCATC CAATGGTTGG TGGTGCAGCA ATTAGGTTTC GAGTTGATGG GATTTTAGAG
CGAATTGCAT CGTTATCCAA GCAACAGCAC GATGGCTTAT CTCGCTTTTT TACTATGAAT
GCTGGCCTTG ATGTGAACCC TCTAATTGCT CAAGATGGAC GAATGCGATT AATTTACGGT
CAACGTGAAA TTGACGTTAG GCTGTCATTA TTGCCCGTAT TTGATGGCAT GAGAATAGTG
TGTCGCCTTC TTGAGCAAGG CAAGCAGTTT TCTTTAGTCA ACAGTGGCTT TTCCCCCTCT
GATTATCGTG CATTAAAACG ACTTGTATCC TACGGCTCCG GAATTGTTTT GTTAACGGGG
CCTACTGGGT CTGGAAAGAC ATCAACACTG TACGCTCTGC TTTCAGAACT TAATAGTGTA
GATGTAAACA TTATGACCTT GGAAAACCCT GTGGAATACG TTTTACCCGG TATATCACAA
GTGCAAATCA ATGATGCTCA AGGTCTTTCT TTTGGTGATA CGTTGCGATC AATACTAAGG
CAAGACCCAG ACATTGTTTT GGTAGGCGAA ATACGCGATG CGGAAACGGC AAAAATAGCA
TCTCAAGCGG CATTAACGGG GCATATAGTC TTGTCTACAC TGCATACCAA TGACGCGATG
GCGACAGTGC CTAGACTTTT GGATCTTGGG ATAAATCCAT CGGTTTTAGC AGATGCATTG
GTTGGTGTCG TTTCACAGCG TCTGGTAAGA AAACTATGTT CATTCTGTAA AACAAAGGTT
ACTAAGCCAC TCAAACCTGA AGAACAGGAA TATGAACGAA TTACCGGTGA GCTGCCTAGC
TGTCGTGCGC TAGGATGTGA TGAGTGCCAC TATACTGGCT ATACGGGGCG CCTTCCTGTT
ACTGAAGTCA TGGAAGTATC ACCAGAGATG CGAGCGGTTA TGTTGAGTGG CTGTAATAAT
GTTAAAGATT TAACAGAAGC GAATAAAGGT TTTCAGTCCC AGATGGCCGT TAGCGCAGGG
CAGTGGATAG TGTCTGGTGA AACAACAGCC CAAGAAATTA GCCGTGAGTT GGGTTTGCGT
TTTTGGCGTG AGCTTGCAAT GGTAAATGAT AAAGCACCAA ATATGTTGCT CGACAATTTT
TCAGGGTCAA ACCCGCTTTC AGAAGATCGC CTCAAAGTAT TATTGATCTC TGATAATAAA
GGGCTTCAAT CAGCGCTAGC TGAAAGTTTT CAATATGGAC TAGTCTTTGT TAATAACGAA
CACAAAGCAT CAGAAATTTT GAAAAAAGAT ACTTCGGTTA TTGCTATTTT AATTGATTCT
GCACTTATGC AGTCTACTCC AGCTGAATGG CTTGGAAAGC TGAGAGAGCA ATTGGCTTGG
TCGGGAACCC CTGTGCTATT TTTAATCCCC CCCAATCAAA ATGAAACCAA AATATTGTTG
AATAAATTCC ATGCTCATGC GATGGAATAC GATGAAAATA TGACCCCTCC GACTGAAATT
GTTAATAAGC TACAAAGCAT ACTGACTAAA GGAACACTCT AA
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| Protein sequence | MVRTSTHWLL DALLSSKPEL VLPDKYNLSM DTREAWHQLQ ETLRLPASAI SEALSLAYST
DGINIQEFKP PRDNPFNERV CREIGILPFD LSVNEPVIAT YDPRLTPEQH EQIRFILRRD
FKLAILSPDE IDIGITRLFS TIDHDYRTID LTSASVEENE TSQLAKAILR SAIDKRASDI
HMHPMVGGAA IRFRVDGILE RIASLSKQQH DGLSRFFTMN AGLDVNPLIA QDGRMRLIYG
QREIDVRLSL LPVFDGMRIV CRLLEQGKQF SLVNSGFSPS DYRALKRLVS YGSGIVLLTG
PTGSGKTSTL YALLSELNSV DVNIMTLENP VEYVLPGISQ VQINDAQGLS FGDTLRSILR
QDPDIVLVGE IRDAETAKIA SQAALTGHIV LSTLHTNDAM ATVPRLLDLG INPSVLADAL
VGVVSQRLVR KLCSFCKTKV TKPLKPEEQE YERITGELPS CRALGCDECH YTGYTGRLPV
TEVMEVSPEM RAVMLSGCNN VKDLTEANKG FQSQMAVSAG QWIVSGETTA QEISRELGLR
FWRELAMVND KAPNMLLDNF SGSNPLSEDR LKVLLISDNK GLQSALAESF QYGLVFVNNE
HKASEILKKD TSVIAILIDS ALMQSTPAEW LGKLREQLAW SGTPVLFLIP PNQNETKILL
NKFHAHAMEY DENMTPPTEI VNKLQSILTK GTL
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