Gene Sbal195_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3362 
Symbol 
ID5755166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3970400 
End bp3971461 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content46% 
IMG OID641289695 
Productmembrane protein 
Protein accessionYP_001555784 
Protein GI160876468 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.019769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGGC AAGCGCTCTA CATTTTAAGG GTCAAAGTGT TATATCTTAA AGGGCTAAAG 
AAAAGCCATA AAATCAGTAG ACTGATCCAA ATTGCCGCCG CCTTCGCCTT GATATTCGGC
TTAGTACAAT TGTGGCAGAC AAGCCTACTA CAAGGTCAGC TGCTTCTAAA GTCCCAAACT
CAAAAGATGG CCAGATTACT GGTACAGCAA ACTGCTTATG GTGCAGCGCC CGCGCTACAA
CTGCAAAATG ATGAGCAGTT GCAATGGCTC GCCAGCGCTT TAGTGGAAGA TCCTAAGGTG
ATGTCTGCGG CTATCTTCAG CGACCAAGGC ATGCGGTTAT CCTTCGCTCA AAGCATCACT
AAGGATGTAG TTGATCCTGA CTCGGAAGAA ATGAATTTGC TGCTAAGCAA ATATCCTCCC
TATGTAGAGC CCGTGATCCA AGAAGGGAAA AATCTAGGTT ATGTCGAAGT CAGGCTTGAT
ACCAAGTTAT TTTTCAACGA AATCAAAGAA GCCCATAATT TAAACATGGA GCAACAACAA
ATCATGCTGC TGGTTGCAGG CTTGATTGGT ATGTTGCTTT CGCGCTCTTT GTCTTTCAAA
CGCGCCGATT TTGACCGCCG CCGCTTTCGG GTTAAATTGC GTCAATCGCC GAAAAAATCT
AAGAAAGAAT CCTCAGCTGA AGATCCATCT GAAAGTGCGA GTGATGGATC AGCGCAAGTG
CTAACCGAAG ATCAACCGGT GTCGACCACT GATAATCCAC AAGAGAAAGC GGCTAAATCC
ACTAAGGCGC CAAAAGCCGT AACAGAGACC AGTGTCGATA AGCTCACTCA GACCAGCATG
CAAACTAAGA CCGAAAAAAC GTCAGAAAAA TCATTGGAGT TACAGGATAA TACAGCAGTT
ACAAACGCGA CAAACGATGC GGAACAAGCG GCACCAGTAA AGGTTAAACC TAAGGTTAAA
AGTGTCCGTC AGGTAAAACA CGCGACTAAA GCAACGGCCG AAACCTCGAC GCCAAAAACA
CCCAGCGAGC TAAGCGATCT CGACACAGAT TCAACCGGTT AA
 
Protein sequence
MIRQALYILR VKVLYLKGLK KSHKISRLIQ IAAAFALIFG LVQLWQTSLL QGQLLLKSQT 
QKMARLLVQQ TAYGAAPALQ LQNDEQLQWL ASALVEDPKV MSAAIFSDQG MRLSFAQSIT
KDVVDPDSEE MNLLLSKYPP YVEPVIQEGK NLGYVEVRLD TKLFFNEIKE AHNLNMEQQQ
IMLLVAGLIG MLLSRSLSFK RADFDRRRFR VKLRQSPKKS KKESSAEDPS ESASDGSAQV
LTEDQPVSTT DNPQEKAAKS TKAPKAVTET SVDKLTQTSM QTKTEKTSEK SLELQDNTAV
TNATNDAEQA APVKVKPKVK SVRQVKHATK ATAETSTPKT PSELSDLDTD STG