Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3362 |
Symbol | |
ID | 5755166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3970400 |
End bp | 3971461 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641289695 |
Product | membrane protein |
Protein accession | YP_001555784 |
Protein GI | 160876468 |
COG category | [R] General function prediction only |
COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.019769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGGC AAGCGCTCTA CATTTTAAGG GTCAAAGTGT TATATCTTAA AGGGCTAAAG AAAAGCCATA AAATCAGTAG ACTGATCCAA ATTGCCGCCG CCTTCGCCTT GATATTCGGC TTAGTACAAT TGTGGCAGAC AAGCCTACTA CAAGGTCAGC TGCTTCTAAA GTCCCAAACT CAAAAGATGG CCAGATTACT GGTACAGCAA ACTGCTTATG GTGCAGCGCC CGCGCTACAA CTGCAAAATG ATGAGCAGTT GCAATGGCTC GCCAGCGCTT TAGTGGAAGA TCCTAAGGTG ATGTCTGCGG CTATCTTCAG CGACCAAGGC ATGCGGTTAT CCTTCGCTCA AAGCATCACT AAGGATGTAG TTGATCCTGA CTCGGAAGAA ATGAATTTGC TGCTAAGCAA ATATCCTCCC TATGTAGAGC CCGTGATCCA AGAAGGGAAA AATCTAGGTT ATGTCGAAGT CAGGCTTGAT ACCAAGTTAT TTTTCAACGA AATCAAAGAA GCCCATAATT TAAACATGGA GCAACAACAA ATCATGCTGC TGGTTGCAGG CTTGATTGGT ATGTTGCTTT CGCGCTCTTT GTCTTTCAAA CGCGCCGATT TTGACCGCCG CCGCTTTCGG GTTAAATTGC GTCAATCGCC GAAAAAATCT AAGAAAGAAT CCTCAGCTGA AGATCCATCT GAAAGTGCGA GTGATGGATC AGCGCAAGTG CTAACCGAAG ATCAACCGGT GTCGACCACT GATAATCCAC AAGAGAAAGC GGCTAAATCC ACTAAGGCGC CAAAAGCCGT AACAGAGACC AGTGTCGATA AGCTCACTCA GACCAGCATG CAAACTAAGA CCGAAAAAAC GTCAGAAAAA TCATTGGAGT TACAGGATAA TACAGCAGTT ACAAACGCGA CAAACGATGC GGAACAAGCG GCACCAGTAA AGGTTAAACC TAAGGTTAAA AGTGTCCGTC AGGTAAAACA CGCGACTAAA GCAACGGCCG AAACCTCGAC GCCAAAAACA CCCAGCGAGC TAAGCGATCT CGACACAGAT TCAACCGGTT AA
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Protein sequence | MIRQALYILR VKVLYLKGLK KSHKISRLIQ IAAAFALIFG LVQLWQTSLL QGQLLLKSQT QKMARLLVQQ TAYGAAPALQ LQNDEQLQWL ASALVEDPKV MSAAIFSDQG MRLSFAQSIT KDVVDPDSEE MNLLLSKYPP YVEPVIQEGK NLGYVEVRLD TKLFFNEIKE AHNLNMEQQQ IMLLVAGLIG MLLSRSLSFK RADFDRRRFR VKLRQSPKKS KKESSAEDPS ESASDGSAQV LTEDQPVSTT DNPQEKAAKS TKAPKAVTET SVDKLTQTSM QTKTEKTSEK SLELQDNTAV TNATNDAEQA APVKVKPKVK SVRQVKHATK ATAETSTPKT PSELSDLDTD STG
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