| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3332 |
|---|
| Symbol | |
|---|
| ID | 5755136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3929961 |
|---|
| End bp | 3930941 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641289665 |
|---|
| Product | putative CheW protein |
|---|
| Protein accession | YP_001555754 |
|---|
| Protein GI | 160876438 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA TAAAAAAATC AGAAATATTG ACCGAAAGTG GCACAAATGA ACTCGAAATT
ATTGAGTTTC ATCTGCATAA GATACTCCCT AATGGAGGCC ATAAAGTGTG TCATTACGGG
ATCAATGTCG CCAAAGTGAG GGAAGTGATT AGGGTGCCAG AAACCTCAGA TTATCCCAAT
GCTCAGCCGC ATATGGTGGG GGTGTTCTCG TTGCGAGAAA AGCTGATCCC TTTAGTCGAT
CTTGCAGGTT GGCTCGGGAT CTCTACACCG GAGGATTTAA CCCACAAAGT CGTTATCGTC
ACTGATTTTA ATAAGATGAT TAATGGTTTC TTAATAGATA GCGTTCGTAG CATTCATCGT
GTGTCGTGGG AGCAAGTTGA ATCACCGAGT CAATTTTTAG AAGCGGGTGA AAATGATTGT
GTCGTTGCTG TGGTTCGCCG TGATGGCATG CTGATTATGA TATTGGATTT TGAGAAGATT
ATTGCCGATA TCAATCCTGA ACTGAGTATG GATAAGTACG ATGTCACGCT CGATAGGAGT
GTGCTGATTA ATGACAAAAT GCTGGCAAAA CGTGAAGCGA AAACGATTTT AATCGTCGAT
GACTCTGCCT TCATTCGCAA AATGATCGAA AATACGCTCC GCAGCGCAGG TTACAACATT
ATTACCGCCA AAGATGGTGG TGATGCTCTT GAAATGCTAA TGGAATTTGA GAGCCTGGCT
GAGCAAGATA ATGCCTCTAT TTCTGATTTT GTCAGTGCTG TTATCACGGA CGTTGAAATG
CCTCGCATGG ATGGGATGCA TCTGGTTAAA CGATTAAGAG AATCCAAGGC ATACCAACAA
ATGCCGATTG TGATGTTTTC TTCCCTAATG AGCGAGGATA ACCGCACAAA GGCGATGGCA
TTGGGGGCAA ATGACACTAT TACTAAACCT GAAATTGGCC GTATGGTCGG TATGATAGAT
AAATACGTAT TCGAAGAGTA A
|
|---|
| Protein sequence | MSEIKKSEIL TESGTNELEI IEFHLHKILP NGGHKVCHYG INVAKVREVI RVPETSDYPN
AQPHMVGVFS LREKLIPLVD LAGWLGISTP EDLTHKVVIV TDFNKMINGF LIDSVRSIHR
VSWEQVESPS QFLEAGENDC VVAVVRRDGM LIMILDFEKI IADINPELSM DKYDVTLDRS
VLINDKMLAK REAKTILIVD DSAFIRKMIE NTLRSAGYNI ITAKDGGDAL EMLMEFESLA
EQDNASISDF VSAVITDVEM PRMDGMHLVK RLRESKAYQQ MPIVMFSSLM SEDNRTKAMA
LGANDTITKP EIGRMVGMID KYVFEE
|
|---|
| |