Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3316 |
Symbol | |
ID | 5755120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3910736 |
End bp | 3911503 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289649 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001555738 |
Protein GI | 160876422 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.410872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTA TTCTACCTGA ACAGCAATTT AATCCAGACC AGCTGGATAA TCTGGTCATT GGCATTGCCG CAGATATGGG CGAACACGAC TCGGGAGTGC ATTACCACAG AAAAGCACAA CTGCTGTACG CTCCCACAGG CGTGATGAGA TTCACCCTAG CCGATACTCA AATGGTGTTA CCGCCAACGC GTGCGGCTTG GTTGCCAGCT AGCGTTAAGC ACAGCGTTAC CATGCGTAAT GTGGTTGCCT ATCGCTCACT CTACTTTGAA CCAGAAACCG TCACTTCATT GCCCGATAAA GTCACTATTT TCCATGTAAA CCCGCTACTC AAAGCGTTAA TCGACACTAT GTCGTTTTGG CCTTGGGACA AACCAAGAAG CACTCAACAC AATGCCTTTT TGCTGCTCTG CGAAGAATTG GGCCATGCCG CGGAAGAAAA TCTGGCTTTA CCCCTCCCAC AGGATAAACG TTTAAAAACC TGGCTTGCGC AACTGCAGCA ACACCAAAAA CCGCCAGCTA ATCTTAAGGA TATGGCAGTA GAAATCGGAG CCAGTGAACG CACAATTAGC CGTATTTTTA GCGTACAGAC GGGAATGGCT TATCAAGCAT GGCGCCAGCA ATGGCGTTTA CTCTCGGCCA TTGAACAATT GGCGGCGGGG AAATCGGTGG CGCAGGTGGG CTTTAATCTA CAATTTTCCA GTGACAGTGC CTTTATCAGC TTTTTTAAGC AATATACCGG CACCACACCG GCACAATATT TCAAATAA
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Protein sequence | MAFILPEQQF NPDQLDNLVI GIAADMGEHD SGVHYHRKAQ LLYAPTGVMR FTLADTQMVL PPTRAAWLPA SVKHSVTMRN VVAYRSLYFE PETVTSLPDK VTIFHVNPLL KALIDTMSFW PWDKPRSTQH NAFLLLCEEL GHAAEENLAL PLPQDKRLKT WLAQLQQHQK PPANLKDMAV EIGASERTIS RIFSVQTGMA YQAWRQQWRL LSAIEQLAAG KSVAQVGFNL QFSSDSAFIS FFKQYTGTTP AQYFK
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