Gene Sbal195_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3304 
SymbolnrdR 
ID5755108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand- 
Start bp3894486 
End bp3894935 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID641289637 
Producttranscriptional regulator NrdR 
Protein accessionYP_001555726 
Protein GI160876410 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.311833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000761879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCTCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGTACCGAAT GCCATGAAAG ATTTACCACC 
TTCGAAGGCG CCGAGTTAGT CATGCCTAGG GTGATTAAAC GTGATGGTTC ACGCCAACCC 
TTCGATGAAG AAAAACTCCA AGGTGGCATG CTGCGCGCGG TTGAAAAACG CCCCGTGTCT 
ATGGATGAAA TCGAGCAAGC GCTTAGCAAA ATCAAATCTA CCCTACGCGC CACTGGCGAG 
CGGGAAGTGC CCTCAGAAAT GGTCGGTAAC TTGATGATGG AGCAATTGAT GAGCCTAGAT 
AAAGTCGCCT ATATACGTTT TGCTTCTGTG TACCGTGCCT TTGAAGACGT ATCTGAATTT 
GGTGAGGCCA TCGCTAAACT GCAAAAGTAG
 
Protein sequence
MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP 
FDEEKLQGGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK