| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3303 |
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| Symbol | |
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| ID | 5755107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3893306 |
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| End bp | 3894460 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641289636 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001555725 |
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| Protein GI | 160876409 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.608141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000809606 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTTGA ACATAAGTTG GTCTGTACTC GATACACAAA TGATGAGCCG CGCGATTCAA
TTAGCGCGCA AAGGCTTTTA CACCACGAGA CCCAATCCCT GTGTGGGCTG CGTTATCGTT
AAAGATAACC AGATTGTTGG CGAAGGTTAT CATCAAAAAG CGGGTGAACC CCACGCCGAA
GTGCATGCGC TACGTATGGC AGGTGAACAC GCCCGCGGCG CAACGGCCTA TGTCACCTTA
GAGCCCTGCA GCCATTATGG CCGCACGCCG CCCTGCGCCT TGGCGCTGAT CAATATTGGC
GTTAAACGTG TGGTGGTAGC GGTTGAAGAT CCTAATCCGC AAGTCGGTGG TCGCGGTATT
CAAATGCTGC GCGACGCAGG TATTGAAGTG GATGTGGGAT TACATCGCGA TGAAGCCTAT
GCCTTGAATT TAGGCTTTAT GAAGCGGATG GAATCGGGTT TACCCAGAGT TACAGTCAAA
TTGGCTGCGA GTCTTGATGG TAAAACCGCG CTGTCTAACG GTGTGTCTAA ATGGATTACC
GGGCCTGAAT CTCGCCGCGA CGTGCAGCGC TTACGCTTAC GTTCCTGCGC GTTGGTGACT
GGGATTGAAA CCATACTGGC GGACGATCCC TCACTCAATG TGCGATATCA AGAACTTGGT
GGCTTGAAAG ACAGCGTAAC CGAGGCGCAA TTACTGCAGC CGTTAAGAGT GATACTCGAC
AGTCGCGCCC GTTTGCCCTT ATCGGCCGCA TGTTTGGCTA TCGTATCGCC GATACTCTTG
GTCTCGACCG TGGCTTATCC CGCAGAGTTT CAAGCACAAT TGCCCTCCCA TGTGAGTTGC
CTCGTGTTAC CTGCAATTGC AGGTCGCGTA TCCTTACCTG AACTATTAAG CTATTTAGGC
CAAAGCTGTA ATCACGTGCT AGTGGAAGCG GGTGCAACCT TAGCGGGCGC TTTTTTAGCA
GAGGGGCTGG CCGATGAATT AGTGCTGTAC CAAGCGATGA AAATCCTCGG TGGGCAAGGG
CGTAATCTAT TGCAGCTACC CGATTATCAA ACCATGGCGC AAATTCCTGC ATTAACTTTG
GTCGATGAGC GCAAATTAGG GCCAGATACC CGTTTAATCT TGAGCGTTAA GCTTGATACT
TCTTTATTTA ATTAA
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| Protein sequence | MSLNISWSVL DTQMMSRAIQ LARKGFYTTR PNPCVGCVIV KDNQIVGEGY HQKAGEPHAE
VHALRMAGEH ARGATAYVTL EPCSHYGRTP PCALALINIG VKRVVVAVED PNPQVGGRGI
QMLRDAGIEV DVGLHRDEAY ALNLGFMKRM ESGLPRVTVK LAASLDGKTA LSNGVSKWIT
GPESRRDVQR LRLRSCALVT GIETILADDP SLNVRYQELG GLKDSVTEAQ LLQPLRVILD
SRARLPLSAA CLAIVSPILL VSTVAYPAEF QAQLPSHVSC LVLPAIAGRV SLPELLSYLG
QSCNHVLVEA GATLAGAFLA EGLADELVLY QAMKILGGQG RNLLQLPDYQ TMAQIPALTL
VDERKLGPDT RLILSVKLDT SLFN
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