| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3241 |
|---|
| Symbol | |
|---|
| ID | 5755037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3813924 |
|---|
| End bp | 3815225 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289566 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001555663 |
|---|
| Protein GI | 160876347 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTCCCCC GAGATTTTGC GCGCTATCTC AGATTGCGGT
TATCAACAAA TGACGCCTAT TCAGCAGCAA GCGATACCTG CTATCCGCCG CGGCCAAGAT
GTCTTAGCCA GTGCCCAAAC CGGTACGGGT AAAACCGCCG CCTTCGCGCT GCCGATCCTG
CAAAAGATGG TTGAAAATCC AAGCGAAACG TTAAAGTCGA ATGCCCGCGT ATTAATTCTT
ACGCCGACCC GTGAGCTTGC GGCTCAAGTC GCTGACAACG TTACGGCTTA CTGCAAGTAC
TTAAACTTCA GCGTGTTAAC CATTTATGGT GGCGTAAAGA TAGAAACACA AGCGCAAAAG
CTGAAACGCG GCGCCGATGT GATTGTTGCC ACCCCAGGTC GCTTACTTGA GCACCTTACC
GCCTGTAACT TAAGCCTGTC GAACGTCGAC TTTTTAGTCC TAGACGAAGC CGACCGTATG
TTAGACATGG GCTTTAGCGC CGATATCCAA AAGATCCTGC AAGCGGTAAA TAAGAAACGT
CAAAACCTAT TGTTCTCGGC CACTTTCTCA AGTGCGGTGA AAAAACTCGC CAACGACATG
ATGGTTAAAC CACAAGTGAT CAGCGTTGAT AAGCAAAACA CGACGGCTGA TACGGTTAGC
CAAGTGGTTT ATCCGGTTGA ACAACGCCGT AAACGTGAAC TGCTGTCTGA GCTAATTGGC
AAGAAAAACT GGCAACAGGT ATTGGTATTT ACCGCGACCC GTGATGCCGC CGATACGCTA
GTCAAAGAAT TGAATTTAGA TGGGATCCCA TCTGAAGTGG TCCACGGTGA TAAAGGCCAA
GGCAGTCGTC GCCGCGCCCT GCGTGAGTTT GTTGCAGGTG ATGTACGCGT ACTGGTTGCC
ACCGAAGTTG CCGCCCGTGG TCTGGATATC CCAAGCCTTG AATACGTAGT CAACTATGAC
TTACCTTTCC TCGCAGAAGA CTATGTCCAC CGTATCGGTC GTACAGGCCG TGCGGGGAAA
ACTGGCGTAG CCATTTCTTT CGTGAGCCGC GAAGAAGAAC GTACCTTAGC CGATATCGAA
AAACTGATCG GTCAACAAAT TCGCCGCGTC ACTGTGCCAG GTTATGAAGT GGGCAGCCGC
GAATTACTAT TAAAGCAATT GCAAACCCGC CGTAGCTTTG CCAAGAAGCA ACAAAGAACC
GACAACGTCG GCGCTCAAGT TACTGCTGAG AAAAACATGC AAGGCCGCCG CGTAAAAATG
AAGGTGGGTC AAGCACCTAG CAAAGCGAAA AAACTTAAGT AA
|
|---|
| Protein sequence | MRFESFSFSP EILRAISDCG YQQMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVTAYCKY LNFSVLTIYG GVKIETQAQK
LKRGADVIVA TPGRLLEHLT ACNLSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANDM MVKPQVISVD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGDKGQ GSRRRALREF VAGDVRVLVA
TEVAARGLDI PSLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE
KLIGQQIRRV TVPGYEVGSR ELLLKQLQTR RSFAKKQQRT DNVGAQVTAE KNMQGRRVKM
KVGQAPSKAK KLK
|
|---|
| |