Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3237 |
Symbol | |
ID | 5755033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3806934 |
End bp | 3807719 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289562 |
Product | ROK family protein |
Protein accession | YP_001555659 |
Protein GI | 160876343 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.280195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAC TAACAATAGA TGTGGGCGGT ACGACAGCCC TGTTCGAACT TCAGCTCGCG GGACATACAG AACAATATAA AATCCCCACA GGCGAAGGTT TTAAAATTGA AGAGTTAAAT AATCAAATCG CTGCGCTTGA ACGCGATTAC GATTTACAGC ATTACCAATT AGCGATTGGC GTACCAGGAC TCGTACAAAA TAATCGTTTG GTTGCCTGTA AATCGTTACC CGGACTCAAT GGTTTGAGTT TTGACACAGT GAAAACTCAA GGCGAGCTTA AGTTTATCTG CAACGATATG GATGCGGGTA TGCAAGCCAC GTGCGATGCC AAATATGCCT GTGAGTTGTT GGTCATGTGC GGCACTGGGA TAGGGATGTC GATTGCGTTT AATGGGCAAG CCTTTACAGG TGCGACGGGG GTTTCAGGGG AGTTGGGCCA TTGCCGCGTG ATGACAGAAT CAGGCGAATT TAGTTTAGAA CAACTCGCCA GTGGCGATTC TGTGCGTAGC CGTAACATCA CTACTCAGGA TGATTTATAC CGTGCGGGCA GTTACCTTGG TATGGGGCTG GCGTGGACCG TGAATTTATT TAATCCCAAT CGGATTTGGC TCGCGGGTAA CATGATGAAC AGTGCTCCTT ACTACAAAGG CTGCCTCGAA AGCTTAAAGC AAATGGCATT GAGCGCGCCC TTAGCTGAGA TGAAAATCAA CCGCGTCGAT GATATGGAAA CCTTAGTGTG CCGAGGTTTA TCTGTGATGC TCGCAAGGGA TTATCCTCGC GCATAA
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Protein sequence | MQILTIDVGG TTALFELQLA GHTEQYKIPT GEGFKIEELN NQIAALERDY DLQHYQLAIG VPGLVQNNRL VACKSLPGLN GLSFDTVKTQ GELKFICNDM DAGMQATCDA KYACELLVMC GTGIGMSIAF NGQAFTGATG VSGELGHCRV MTESGEFSLE QLASGDSVRS RNITTQDDLY RAGSYLGMGL AWTVNLFNPN RIWLAGNMMN SAPYYKGCLE SLKQMALSAP LAEMKINRVD DMETLVCRGL SVMLARDYPR A
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