| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3172 |
|---|
| Symbol | |
|---|
| ID | 5754964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3746752 |
|---|
| End bp | 3747345 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641289493 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_001555594 |
|---|
| Protein GI | 160876278 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000900168 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000325363 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT ACGTTTCATT TTTAGCCGCC AGCTGTATTT ATGGCTTAGT GCTGATGAGC
CCCAATGTGC TTGCCAGTGA GAAAAACCAG GTTCTTATGG GTGAAAAAAC CGTCACCTTG
GAAGGCAAGT TACCTAAGCT GTCGCAAATG GCGCCAGGAT TCAAAGTGGT TGATGATCAT
TTTGCGCCAG TTATGCTAAG CGACTTTAAG GGTAAAACCG TGCTGATAAG TGCCGTACCA
AGCTTAGATA CGGGCGTGTG TGCACTACAA ACTAAACGTT TCAACAGCGA AGTAGGCCAT
TTTTCCGATG ACGTGGTCAT GCTAACCATC AGTGCCGATT TACCCTTCGC ACAGAAACGT
TTCTGCAAAG TAGAAAACGT AGATAAAATC AAAGTACTAT CCGATTCCGT CTGGCGTGAT
TTTGGTGAAA AATATGGCTT GTTGATTCAA GATTACGGCT TGCTCGCGAG AGCTATTTTC
ATCATAGATG CCGAAGGTAA ACTCCAATAC CAAGAGTTAG TACCGAATAT CACCGAGCAT
CCTAACTATG ATGCCGCACT TGAAGCGCTG AAAACCATTC AAGCACAGCA GTAA
|
|---|
| Protein sequence | MQKYVSFLAA SCIYGLVLMS PNVLASEKNQ VLMGEKTVTL EGKLPKLSQM APGFKVVDDH
FAPVMLSDFK GKTVLISAVP SLDTGVCALQ TKRFNSEVGH FSDDVVMLTI SADLPFAQKR
FCKVENVDKI KVLSDSVWRD FGEKYGLLIQ DYGLLARAIF IIDAEGKLQY QELVPNITEH
PNYDAALEAL KTIQAQQ
|
|---|
| |