| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3165 |
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| Symbol | |
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| ID | 5754957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3738684 |
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| End bp | 3740423 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641289486 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001555587 |
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| Protein GI | 160876271 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.624427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00241131 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAGCA CTAAACCGCT GAAAAGCCTA AAACAAAAAA TAACCTTAGC CTTCTATATC
ATAGTGGGCA TGGCGCTGTT TAATGGTGTC GTCGCCATAC TGCTGTCACA GCAACTGAAA
TCAGAAATTG AGCATTTAGT GGGAGTGGAT GTTGTTAAAG TCACCACTGC ACTGCAACTG
GCAAAAAACA GTGAAAAACT GCAAATCATC ACAGCACGTT TAAATCATTA TGATAATGAA
CAGCAAAGAC TTCGCCTATT GAGTGAGCTC TCGGCGCAGT GGGAACTATT AATTAATGAC
TCCCGATTAC TGGCCTTGAT TGAAACCGCT ACTGTCAGTA AGCAAGAATT GAATCACGCG
TTAGATATCC AACTTTACTA TTTACAACAG CTGCCATTAC TTGCCGAGTT AACCGATTCC
GCCCTACAAG CCAATTTACA AGCAACAAAT ATTCAAGCCA ATTTAACCTC AATGGCATCG
GGATTTACCG ATGAAATGCA GACCCAATTT CACAGCATCA ATGCCGATTC AGAGCGTCAG
CTTAAGCTGA AAAACTTTGA CAAGATTGCG ATGAATATCA ATACCAACCA GCAATTGTCT
CAATTTAGTC ATTTGGGGGA ACACTTATTT ACCCGCCTAT CTCAGGTAAA GATTATCGAC
AATCTGGTTG AACTTAACCG CACCCAGAGA GAAGCGATGC GACTACTGTT AAATATGGAG
GCGATTCTCG AGGGCGTTAG CGGGGATACC AGTTTATATT TCAATTTGTT ATCGCAAATA
AAACAGACCA TGGTCGGTGA AGATAACCTG TTTGAACTTT CCCGCAAGGC CATTAAAAGC
ACACATATCG CCAATGCGCA TTTAGAGTAC CAAGCCGATG CCGCGCAAAT CGTCGCGACC
TATACCCAAA ATCTGGTCAA CCAAGTCGAG AATGAAATCC AACAAACGGG CGGCGAACTT
AAAAGCGACA GCACCGCATT TATCATATTG ATTTTCTGCA GTGGTATTCT GTATTGCTTC
TTCATCTGGC TCACCAGCTG GCACTTTATC ACTAAGGGCA TTATCAAACC TGTGATGGCG
ACGCGAGATG CCATGAACGC TATCGCCAAT GAAAAGCTCG ACACCCACAT GCCGGTCACT
GACAACCTAG AACTGCAGCA AATGGTGAAC TCTTTAGAAA CACTAAAAAG CTATGCGGCA
CAGGTTAAAG GAATGGCGGA AACTGACGGA CTAACAGGCT GCTACAACCG CCGTTATTTA
GATATACAAC TCCAAAAAGA ACTCGAGTAT GCAAGGGATC ACAATATGCC CCTTGGCATC
ATTCTGTTTG ATATTGATAA TTTTAAACAA TTTAACGACA GGTACGGCCA TGTCGCCGGT
GATCAATGTC TGAAAAACAT TGTTAACGCC GCTAAATCCA TCTTAAAACG CCCAACTGAC
ATGCTAGCCC GCTATGGCGG TGAGGAATTT ATGATAGTGC TGCCATCGAG TCATCTCGAG
GAGGTCTATC AATTTGCCGA ACGATTACGG GAGAAAATCA TCAGCCTAGA AATTCCCCAT
GAAGACTCTC CCCATGCGGG CATACTTACC ATCAGCGCCG GGATTACTTG CTGGCAACTA
CCGCAACAGC TGGATGCCAA TAGTTTAATT AATCGAGCCG ATGAAGCCCT CTATCATGCC
AAACTGACGG GGCGTAACCG CACCGAAGCC CTCCTCGGTC AACCCATTCG GTATTCCTAA
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| Protein sequence | MTSTKPLKSL KQKITLAFYI IVGMALFNGV VAILLSQQLK SEIEHLVGVD VVKVTTALQL
AKNSEKLQII TARLNHYDNE QQRLRLLSEL SAQWELLIND SRLLALIETA TVSKQELNHA
LDIQLYYLQQ LPLLAELTDS ALQANLQATN IQANLTSMAS GFTDEMQTQF HSINADSERQ
LKLKNFDKIA MNINTNQQLS QFSHLGEHLF TRLSQVKIID NLVELNRTQR EAMRLLLNME
AILEGVSGDT SLYFNLLSQI KQTMVGEDNL FELSRKAIKS THIANAHLEY QADAAQIVAT
YTQNLVNQVE NEIQQTGGEL KSDSTAFIIL IFCSGILYCF FIWLTSWHFI TKGIIKPVMA
TRDAMNAIAN EKLDTHMPVT DNLELQQMVN SLETLKSYAA QVKGMAETDG LTGCYNRRYL
DIQLQKELEY ARDHNMPLGI ILFDIDNFKQ FNDRYGHVAG DQCLKNIVNA AKSILKRPTD
MLARYGGEEF MIVLPSSHLE EVYQFAERLR EKIISLEIPH EDSPHAGILT ISAGITCWQL
PQQLDANSLI NRADEALYHA KLTGRNRTEA LLGQPIRYS
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