Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3152 |
Symbol | |
ID | 5754944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3726904 |
End bp | 3727995 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289473 |
Product | hypothetical protein |
Protein accession | YP_001555574 |
Protein GI | 160876258 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.364653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00831155 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAACCC TCATCATTAT AGTGCTTGTC GCTGTCGGAG TTTCTTTTCT GTGCAGTGTG TTCGAAGCTG TTCTGCTATC GGTTACCCCA AGTTATATCG CATCACTCGA ACAAACTGAC AGTGCCGCAG CCACGCGCTT GCGTAAACTG AAAGAAAATG TCGAAGCCCC TTTGGTGTCA ATCCTTACGT TGAATACTAT CGCCCATACC GTCGGCGCCG CCGTTGCGGG TGCGCAAGCA GCGAAAATAT TTGGTGACGA TATGTTGGGT GTTTTCTCGG GCGTATTGAC CTTTATTATT CTGTTCTTCT CAGAAATTAT TCCTAAATCA TTAGGTGCCA ACCATTGGCG TCGCCTCGCA CCGAGCGTGT CTGTTGCCGT GATGTGGATG AAGCGTGTCA CTAGACCGCT GATCTGGATG TCGCAGCAAG TTACTCGTTT GATGGGCAAA GGTGATGAAG GCCATTATAT CCGCCAAGAA ATGAGCGCTA TGGCCAAAAT CGGCCATGAA TCCGGTGAGC TTGATGAGCA AGAGTCAAAA ATTCTGACAC AAATGCTCAA GGTACGTGAT ATGCCCGTTA CGGCAATCAT GACACCACGC ACTGTGATGT TCTCGCTGCC AGTGGATCTA ACTCAAAATG AGTTTGTGCG CCAATATCGC GACAAACCTT TTACCCGTAT TCCCGTGTAC GACCAAGATC ATGATGATGT GATTGGTTAC ATTACCCGCA CCGATGTGTT GCTGGCTGAG CGTTACACGC CAGAAGCGCC GATTGGTGAG CTTAAACGGA GTTTATTTGT GGTGCCTGAA ACCGCAAAAA TTCTGCCACT TTTTGAGCGT ATGATTAAGC GTAACACCCA AATTGCTATG GTGGTCGACG AGTACGGCAG CAGCCAAGGT ATAGTGACTC AAGAAGATAT TATCGAATCT ATGTTAGGAT TAGAGATTGT CGATTTAAAC GATCCCGCGA CCGATATGCA GCAATTAGCA CGTAAACTTT GGACTAAGCG CATGAAGCAA AAAGGTATTC GCCTATCCGA TGACGGTGAT TTTGAAGCTG CATCCGATGA TGACGAAGCC AAATCCGGCT GA
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Protein sequence | MLTLIIIVLV AVGVSFLCSV FEAVLLSVTP SYIASLEQTD SAAATRLRKL KENVEAPLVS ILTLNTIAHT VGAAVAGAQA AKIFGDDMLG VFSGVLTFII LFFSEIIPKS LGANHWRRLA PSVSVAVMWM KRVTRPLIWM SQQVTRLMGK GDEGHYIRQE MSAMAKIGHE SGELDEQESK ILTQMLKVRD MPVTAIMTPR TVMFSLPVDL TQNEFVRQYR DKPFTRIPVY DQDHDDVIGY ITRTDVLLAE RYTPEAPIGE LKRSLFVVPE TAKILPLFER MIKRNTQIAM VVDEYGSSQG IVTQEDIIES MLGLEIVDLN DPATDMQQLA RKLWTKRMKQ KGIRLSDDGD FEAASDDDEA KSG
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