Gene Sbal195_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3152 
Symbol 
ID5754944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3726904 
End bp3727995 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content47% 
IMG OID641289473 
Producthypothetical protein 
Protein accessionYP_001555574 
Protein GI160876258 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.364653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00831155 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACCC TCATCATTAT AGTGCTTGTC GCTGTCGGAG TTTCTTTTCT GTGCAGTGTG 
TTCGAAGCTG TTCTGCTATC GGTTACCCCA AGTTATATCG CATCACTCGA ACAAACTGAC
AGTGCCGCAG CCACGCGCTT GCGTAAACTG AAAGAAAATG TCGAAGCCCC TTTGGTGTCA
ATCCTTACGT TGAATACTAT CGCCCATACC GTCGGCGCCG CCGTTGCGGG TGCGCAAGCA
GCGAAAATAT TTGGTGACGA TATGTTGGGT GTTTTCTCGG GCGTATTGAC CTTTATTATT
CTGTTCTTCT CAGAAATTAT TCCTAAATCA TTAGGTGCCA ACCATTGGCG TCGCCTCGCA
CCGAGCGTGT CTGTTGCCGT GATGTGGATG AAGCGTGTCA CTAGACCGCT GATCTGGATG
TCGCAGCAAG TTACTCGTTT GATGGGCAAA GGTGATGAAG GCCATTATAT CCGCCAAGAA
ATGAGCGCTA TGGCCAAAAT CGGCCATGAA TCCGGTGAGC TTGATGAGCA AGAGTCAAAA
ATTCTGACAC AAATGCTCAA GGTACGTGAT ATGCCCGTTA CGGCAATCAT GACACCACGC
ACTGTGATGT TCTCGCTGCC AGTGGATCTA ACTCAAAATG AGTTTGTGCG CCAATATCGC
GACAAACCTT TTACCCGTAT TCCCGTGTAC GACCAAGATC ATGATGATGT GATTGGTTAC
ATTACCCGCA CCGATGTGTT GCTGGCTGAG CGTTACACGC CAGAAGCGCC GATTGGTGAG
CTTAAACGGA GTTTATTTGT GGTGCCTGAA ACCGCAAAAA TTCTGCCACT TTTTGAGCGT
ATGATTAAGC GTAACACCCA AATTGCTATG GTGGTCGACG AGTACGGCAG CAGCCAAGGT
ATAGTGACTC AAGAAGATAT TATCGAATCT ATGTTAGGAT TAGAGATTGT CGATTTAAAC
GATCCCGCGA CCGATATGCA GCAATTAGCA CGTAAACTTT GGACTAAGCG CATGAAGCAA
AAAGGTATTC GCCTATCCGA TGACGGTGAT TTTGAAGCTG CATCCGATGA TGACGAAGCC
AAATCCGGCT GA
 
Protein sequence
MLTLIIIVLV AVGVSFLCSV FEAVLLSVTP SYIASLEQTD SAAATRLRKL KENVEAPLVS 
ILTLNTIAHT VGAAVAGAQA AKIFGDDMLG VFSGVLTFII LFFSEIIPKS LGANHWRRLA
PSVSVAVMWM KRVTRPLIWM SQQVTRLMGK GDEGHYIRQE MSAMAKIGHE SGELDEQESK
ILTQMLKVRD MPVTAIMTPR TVMFSLPVDL TQNEFVRQYR DKPFTRIPVY DQDHDDVIGY
ITRTDVLLAE RYTPEAPIGE LKRSLFVVPE TAKILPLFER MIKRNTQIAM VVDEYGSSQG
IVTQEDIIES MLGLEIVDLN DPATDMQQLA RKLWTKRMKQ KGIRLSDDGD FEAASDDDEA
KSG