Gene Sbal195_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3117 
Symbol 
ID5754909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3680159 
End bp3681139 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID641289438 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001555539 
Protein GI160876223 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TACTAGTGAC TGGAGCGGAT GGGTTTATCG GCTCTCACCT TGTCGAAATG 
CTAGTTGCAC AAGGTTATCA AGTAAGGGCA CTTAGCCAAT ATAACTCCTT CAATTATTGG
GGTTGGCTTG AAAACATTGA TTGTCTCGAT GAGGTTGAAG TCATTTGTGG AGATATTCGT
GATCCGCACT TCTGTAAACA CTTATGCAAA GATATCGATG TGATTTATCA CCTTGCAGCG
CTTATCGCAA TTCCTTATTC CTATATAGCC CCCGATAGCT ATCTTGATAC CAACGCGAAA
GGCACCCTCA ATATTTGTCA GGCCGCACTT GAAAATAACG TTTCAAGAGT GATTCACACC
TCAACTAGTG AAGTCTACGG CACAGCTAAA TACGTCCCCA TTGATGAACA ACACCCTCTG
CAGCCACAGT CACCTTATAG TGCCTCAAAA ATGGCGGCAG ATGCGATGGC AATGAGTTTT
CACAATAGCT TTGAGTTACC GCTCACTATC GCTCGACCAT TTAATACTTA TGGTCCGAGG
CAATCGGCAC GAGCTGTGAT CCCGACGATT ATTAGCCAAA TTGCTGCGGG AGCGACACAA
ATCAAGTTAG GCGATATCTC CCCTACCCGT GATTTCAACT ACGTGTTAGA TACTTGCCGT
GGCTTCATCG CATTGGCGGC GCATGACAAT TGCATCGGTG AAACGCTCAA TATCTCGTCC
AATTATGAAA TATCAATTGA AGACACTCTG AACATTATCA AGCAAAACAT GCATAGTGAT
GTGGAATTCA TTACGGACGA CGCACGCTTA AGACCTCAAC AATCTGAAGT GTTCAGATTA
TGGGGAGATA ATAGTAAAAT CAAAACACTA ACTGGATACC AACCTCAATT CGACATTCAC
ATAGGATTGA AAGAAACCAT TACTTGGTTC ACCGAACCAG CTAATCTGAG CAAATATAAG
TCTACTATTT ACAATAGATA A
 
Protein sequence
MKKVLVTGAD GFIGSHLVEM LVAQGYQVRA LSQYNSFNYW GWLENIDCLD EVEVICGDIR 
DPHFCKHLCK DIDVIYHLAA LIAIPYSYIA PDSYLDTNAK GTLNICQAAL ENNVSRVIHT
STSEVYGTAK YVPIDEQHPL QPQSPYSASK MAADAMAMSF HNSFELPLTI ARPFNTYGPR
QSARAVIPTI ISQIAAGATQ IKLGDISPTR DFNYVLDTCR GFIALAAHDN CIGETLNISS
NYEISIEDTL NIIKQNMHSD VEFITDDARL RPQQSEVFRL WGDNSKIKTL TGYQPQFDIH
IGLKETITWF TEPANLSKYK STIYNR