| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3060 |
|---|
| Symbol | fliN |
|---|
| ID | 5754851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3631298 |
|---|
| End bp | 3631678 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641289383 |
|---|
| Product | flagellar motor switch protein |
|---|
| Protein accession | YP_001555485 |
|---|
| Protein GI | 160876169 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.255596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.369101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG ACGATACGGA TGATTGGGCT GCAGCAATGG CAGAACAAGC CTTAGAGGAA
GCTAACGCGA TTGAACTCGA TGAATTAGTT GATGATTCAA GACCTATCAC TAAGGCAGAA
GCGGCAAAAT TAGATACTAT TTTAGATATC CCAGTCACTA TCTCTATGGA AGTGGGCCGT
AGCTACATTA GTATTCGTAA CCTGTTGCAG TTAAACCAAG GTTCAGTGGT TGAGCTAGAC
AGAGTTGCGG GTGAGCCCTT AGATGTGATG GTTAACGGTA CGCTGATTGC ACATGGTGAG
GTTGTGGTAG TAAACGATAA ATTCGGTATT CGTTTAACCG ATGTGATCAG TCAAACCGAG
CGAATTAAGA AGCTTAAATA A
|
|---|
| Protein sequence | MSTDDTDDWA AAMAEQALEE ANAIELDELV DDSRPITKAE AAKLDTILDI PVTISMEVGR
SYISIRNLLQ LNQGSVVELD RVAGEPLDVM VNGTLIAHGE VVVVNDKFGI RLTDVISQTE
RIKKLK
|
|---|
| |