| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3048 |
|---|
| Symbol | |
|---|
| ID | 5754839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3619175 |
|---|
| End bp | 3621391 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641289371 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001555473 |
|---|
| Protein GI | 160876157 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.464654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTG ATGTAGATGA AGAGATACTC CAGGACTTTT TAATCGAAGC CGGTGAAATT
TTAGAGCTTC TGCAAGAGCA ACTCGTTGCG CTTGAAAATA ATCCTGATGA CACAAACTTG
CTAAACGCCA TTTTCCGAGG GTTCCATACC GTTAAAGGTG GCGCAGGCTT TCTTAGCTTA
ACTCCCATGG TCGATGTGTG TCATGAGGCT GAAAATACCT TCGATCTATT GCGCACAGGC
AAACGCAGCG TAAATGCAGA GCTGATGGAT ATTATTTTGC AGGCTGTTGA TGCTATTAAT
ACCATGTTTG CTCAAACGCA GCAGGGCGAA CAACAAGATC CTGCTGAGTC AGGCCTGTTG
TCTAGACTTA AAATGCTGAG TTCAGGTGCG CCATTGCCAT CTGAAGTTGC GTCTGCAGAG
GTGGTAGAAG TTGTCGAACC AGAGCCTGTC GTTGAAGCCA TTGTTGAAAC TCCCGTCCCA
CAAGACATTC CCGTAGAGAT AAGTAATAGC TCATCTTCAA GTATTGATGA TATAAACGAT
GCTGAATTTG AAGCCTTGTT AGATGCGCTT CATGGCTCAG GAAAAGGCCC TGCGGCTGCT
ACCGCTGTGG CGTCTGAACC TGTGGTTGCT AAGCCAGCTG CGCCAGTTAA AGCGCCTTCA
GCATCGGGTG ATGACATCAC TGATGATGAG TTTGAGGCAT TGCTTGATGA GCTGCATGGT
TCAGGCAAGT TTAAAGCTGA GGCAGAAGTG CCGGCTAAAC CAAAGGTCGC TTCGGCTCCC
ACGCCTCAAC CGATAGTGGA TGCCGATGAA ATTACCGATG ACGAGTTTGA AAGATTACTC
GATGAACTCC ATGGGAAAGG TGCAGCCCCT GCAAAAGCAG AAGTAAAAGC GCCTACTGCA
CCAGTAACGC CTGCTTCGAC TGCTGCACCT AAAGCCGCTG CGCCTGCTCC AGCTCCCGTT
GTTGCCGCAA AACCGAAAGT GGACATAGCT GTTGTAGAGA AAGCGCCAGC TAAAGCAAGT
TCAGCAAATG TGCCTCAAGG TGAAACGACA GTACGTGTTG ATACTGCACG ACTCGACCAA
ATCATGAATA TGGTGGGCGA GTTAGTGTTA GTGCGTAATC GATTAGTGAG CTTAGGTATC
AGTCGTGATG ATGAGGAAAT GTCTAAGGCC CTTGCGAACT TAGATCTCGT GACTGCCGAT
TTGCAAGGCG CGGTGATGAA AACCCGTATG CAACCGATCA AGAAAGTGTT TGGTCGTTTC
CCTCGGGTAG TACGTGATCT TGCGCGTACA CTCAATAAAG AAATTGATTT GATCATGGTC
GGTGAAGAAA CCGACCTAGA TAAAAACTTA GTTGAAGCGC TTGCCGATCC ACTCGTCCAC
TTAGTGCGTA ACTCGGTGGA TCACGGTATT GAAATGCCAA ATGAGCGTGA AGCCAACGGC
AAGCCGAGAA CGGGTACGAT TACCTTATCT GCAAGTCAGG AAGGTGACCA TATACTGCTA
AAAATCGAAG ACGATGGCGC AGGTATGGAC CCTGAAAAAC TGAAAAAGAT CGCGATAACG
CGTGGTGTGC TTGATGAAGA TTCAGCTTCG CGAATGACTG ACAGCGAAGC GTATAATTTG
ATTTTTGCGC CCGGTTTTTC GACTAAGGTC GAGATTTCAG ATATTTCTGG TCGTGGCGTT
GGGATGGACG TGGTAAAAAC CCGTATCACT CAGCTTAACG GCACAGTGCA TATTGATTCT
ATGAAAGGTA AGGGCACGAT ACTTGAGATT AAAGTACCGT TAACGCTGGC GATTATGCCA
ACCTTAATGG TTGATGTCGC TAAACAAGTG TTTGCATTAC CTCTGTCTAG CGTGAACGAG
ATATTTCATC TCGATCTTAC TAAGACCAAT ATCGTCGATG GACAACTCAC CGTCATAGTG
CGTAACAAGG CTGTGCCTTT GTTCTATTTG GAGCATTGGC TGCATAGAAA TAAAACCACC
TTTAAACATG GCGATAAAAA GCATGGTCAT GTGGTGATTG TACAATTAGG CATGATGCAA
ATTGGTTTTG TGGTTGATGC CCTAATAGGA CAAGAAGAGG TGGTGATTAA ACCCCTTGGC
GCTATGTTAC ACGGCACTCC TGGGATGGCT GGTGCGACTA TTACATCGGA TGGTGGTATC
GCACTGATCT TAGATGTCCC TGGATTGTTA AAGCATTATG CGAAAAGTAA GAATTAG
|
|---|
| Protein sequence | MAFDVDEEIL QDFLIEAGEI LELLQEQLVA LENNPDDTNL LNAIFRGFHT VKGGAGFLSL
TPMVDVCHEA ENTFDLLRTG KRSVNAELMD IILQAVDAIN TMFAQTQQGE QQDPAESGLL
SRLKMLSSGA PLPSEVASAE VVEVVEPEPV VEAIVETPVP QDIPVEISNS SSSSIDDIND
AEFEALLDAL HGSGKGPAAA TAVASEPVVA KPAAPVKAPS ASGDDITDDE FEALLDELHG
SGKFKAEAEV PAKPKVASAP TPQPIVDADE ITDDEFERLL DELHGKGAAP AKAEVKAPTA
PVTPASTAAP KAAAPAPAPV VAAKPKVDIA VVEKAPAKAS SANVPQGETT VRVDTARLDQ
IMNMVGELVL VRNRLVSLGI SRDDEEMSKA LANLDLVTAD LQGAVMKTRM QPIKKVFGRF
PRVVRDLART LNKEIDLIMV GEETDLDKNL VEALADPLVH LVRNSVDHGI EMPNEREANG
KPRTGTITLS ASQEGDHILL KIEDDGAGMD PEKLKKIAIT RGVLDEDSAS RMTDSEAYNL
IFAPGFSTKV EISDISGRGV GMDVVKTRIT QLNGTVHIDS MKGKGTILEI KVPLTLAIMP
TLMVDVAKQV FALPLSSVNE IFHLDLTKTN IVDGQLTVIV RNKAVPLFYL EHWLHRNKTT
FKHGDKKHGH VVIVQLGMMQ IGFVVDALIG QEEVVIKPLG AMLHGTPGMA GATITSDGGI
ALILDVPGLL KHYAKSKN
|
|---|
| |