Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3039 |
Symbol | |
ID | 5754830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3610489 |
End bp | 3611274 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641289362 |
Product | VacJ family lipoprotein |
Protein accession | YP_001555464 |
Protein GI | 160876148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.106365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAA AATGGATGGG ATTATCTTTG GGGTTAATGC TGTTGCCTAA AGTGCAAGCG GCTGAAGTGC CCGTATCAGA TACCATTCAG CAGGAAGCAC CTGCTAAGGT ACAAATCAGC TATGATGATC CCCGCGACCC ATTCGAAGGG TTTAACCGTG CAATGTGGGA TTTTAACTAT CTCTTTTTAG ATAGATATTT ATATCGTCCT GTTGCCCATG GTTATAACGA TTATATTCCA ATGCCAGCTA AAACAGGCGT CAATAATTTT GTACAGAATT TAGAAGAACC TAGCAGCTTG GTAAACAACG TGCTGCAAGG AAAGTGGGGC TGGGCGGCGA ATGCCGGTGG ACGTTTTACC ATCAACTCTA CAGTCGGTTT ATTAGGAGTC ATTGACGTCG CAGATATGAT GGGTATGAGC CGTAAGCAAG ATGAGTTTAA CGAAGTGCTT GGTTATTATG GCGTGCCCAA CGGACCTTAC TTCATGGCGC CGTTTGCGGG GCCTTATGTC GTGCGAGAAC TCGCGTCTGA TTGGGTTGAT GGTCTATACT TTCCCTTGTC TGAGCTAACA ATCTGGCAAA CCATTGTTAA ATGGGGACTT AAAAATCTTC ATTCCAGAGC GTCTGCGATA GATCAAGAAC GACTCGTTGA TAATGCACTC GATCCTTATG CCTTTGTCAA AGATGCGTAT TTACAACACA TGGACTATAA AGTCTATGAT GGTAATGTTC CTCAAAAACA AGATGATGAT GAGTTACTCG ATCAGTATAT GCAGGAGCTT GAGTAA
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Protein sequence | MKLKWMGLSL GLMLLPKVQA AEVPVSDTIQ QEAPAKVQIS YDDPRDPFEG FNRAMWDFNY LFLDRYLYRP VAHGYNDYIP MPAKTGVNNF VQNLEEPSSL VNNVLQGKWG WAANAGGRFT INSTVGLLGV IDVADMMGMS RKQDEFNEVL GYYGVPNGPY FMAPFAGPYV VRELASDWVD GLYFPLSELT IWQTIVKWGL KNLHSRASAI DQERLVDNAL DPYAFVKDAY LQHMDYKVYD GNVPQKQDDD ELLDQYMQEL E
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