Gene Sbal195_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3030 
Symbol 
ID5754821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3598788 
End bp3599867 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content41% 
IMG OID641289353 
ProductdTDP-glucose 4,6 dehydratase 
Protein accessionYP_001555455 
Protein GI160876139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT TAGTAACAGG TGGTGCAGGT TTTATTGGTT CTGCTGTTGT GCGTCATATA 
ATTTGTAATA CTCAAGACAG TGTGATTAAT GTAGATAAAC TGACCTATGC AGGTAATCTA
GAGTCACTGA CCAGTGTTGC TGACAATGCT CGCTATACAT TTGAAAAAGT CGATATTTGT
GACCGCGGTG AACTCGATAG GATTTTTTTA CAGTATCAAC CAGATGCTAT TATGCATTTA
GCAGCAGAGT CCCATGTTGA CCGCTCAATT ACTGGCCCTT CAGATTTTAT TCAGACCAAT
ATTATTGGAA CCTACACCTT ATTAGAAGCT GCACGCCACT ATTGGATACA ACTCGATTCT
GAGCGTAAAG CAGCATTTCG CTTTCATCAT ATTTCAACTG ATGAAGTGTA TGGCGATTTA
CCTCATCCAG ATGAGCATGA AGGACAAGTG GTCAATCAAG AGCTGCCTTT ATTTACTGAG
ACCACGCCTT ATGCACCTAG CAGTCCATAT TCTGCTTCTA AAGCTTCAAG CGACCATCTA
GTACGCGCAT GGTTGCGTAC CTATGGCTTA CCGACCATAG TGACCAACTG CTCAAATAAC
TACGGGCCTT ATCATTTCCC TGAAAAGTTA ATTCCACTGG TGATATTGAA TGCACTAGAA
GGAAAGCCTT TACCTATTTA CGGTAAAGGT GACCAAATTC GCGATTGGCT TTATGTTGAA
GATCATGCTC GCGCGCTATA TAAAGTTGTT ACGGAAGGTA AGGTTGGTGA AACCTACAAT
ATTGGTGGGC ATAACGAAAA GAGAAATCTT GAAGTGGTGC AAACTATTTG CAGTATTTTA
GATGTTCTTA TGCCTAAAGG GACTCCTTAC GCTGAGCAAA TTACCTATGT AACGGATAGG
CTAGGTCATG ATCGTCGCTA TGCTATCGAT GCGAGCAAAA TGAGTGCTGA ACTAAATTGG
CAACCACAAG AAACCTTTGA AACGGGCCTC CTAAAAACTG TTGAATGGTA TTTAGCAAAC
CAAGAATGGT GCCAGCATAT TCAAGACGGC ACTTATCAGC GAGAGCGTTT AGGCATTTAA
 
Protein sequence
MKVLVTGGAG FIGSAVVRHI ICNTQDSVIN VDKLTYAGNL ESLTSVADNA RYTFEKVDIC 
DRGELDRIFL QYQPDAIMHL AAESHVDRSI TGPSDFIQTN IIGTYTLLEA ARHYWIQLDS
ERKAAFRFHH ISTDEVYGDL PHPDEHEGQV VNQELPLFTE TTPYAPSSPY SASKASSDHL
VRAWLRTYGL PTIVTNCSNN YGPYHFPEKL IPLVILNALE GKPLPIYGKG DQIRDWLYVE
DHARALYKVV TEGKVGETYN IGGHNEKRNL EVVQTICSIL DVLMPKGTPY AEQITYVTDR
LGHDRRYAID ASKMSAELNW QPQETFETGL LKTVEWYLAN QEWCQHIQDG TYQRERLGI