Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3019 |
Symbol | |
ID | 5754810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3589070 |
End bp | 3590263 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641289342 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_001555444 |
Protein GI | 160876128 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0876853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTTAT CAAATACTGG AAGTAAAATG AAAATTGCTA TTGCTGGTAC AGGTTATGTC GGCCTCTCAA ATGCTGTGTT ATTAGCTCAG CACCATCAAG TTTTTGCGGT TGATGTTATC GCTGATAAGG TTGCGTCAAT TAACAATCGT AAGTCACCGA TTATTGATGC CGAGATAGAA GATTTTTTAA CACATCGAGA GCTTAATTTA ACTGCGACCT TGGATAAGCA ACTTGCTTAT CAAGATGCTG AATTTGTGAT CATTGCGACG CCAACGGATT ATGATCCAAA AACCAATTAT TTTAATACTT CCTCTGTTGA GTCGGTTATT CAAGATGTTA TTGGCATTAA CCCTAATGCG GTGATGGTGA TCAAATCTAC CGTGCCAGTG GGCTTTACTG CCAAGGTTAA GCAAAAATAT CATTGCGATA ATATTCTCTT TTCGCCAGAG TTTTTGCGTG AGGGTCGGGC GCTTTACGAC AATTTGCATC CATCGCGCAT TATTGTTGGT GAACGTAGTG AACGTGCTAA AGTGTTTGCC GATTTATTAG TGCAAGGCGC CATAAAAAAA GATATTCAAG TCTTATTTAC TGATAGCACT GAAGCTGAGG CAGTTAAATT ATTTTCTAAC ACTTATCTTG CTATGCGTGT TGCTTATTTT AACGAACTTG ATACTTATGC TGAAACTCAT GGGCTAGATT CTCGGCAGAT TATTGAGGGG GTGTGTTTAG ATCCGCGAAT TGGTGATCAT TACAATAATC CTTCTTTTGG TTATGGTGGT TATTGCTTAC CTAAAGATAC CAAACAACTG CGAGCGAACT ATGCCGATGT GCCTAATAGC ATTATTGGTG CGATTGTGGA ATCTAATACC ACCCGTAAAG ACTTTATCGC TGACTCTATT TTAAGCCGTA ATCCTAAGGT TGTCGGTATT TATCGGCTGA TTATGAAGTC TGGTTCTGAT AATTTTAGAG CCTCGAGTAT TCAAGGGATT ATGAAACGCC TCAAGGCTAA AGGTGTAGAG GTCATAGTGT ATGAGCCAGT ACTTAAAGAG AAAGAGTTCT TCCATTCCCG TGTAGTTACC GATTTAACAG CCTTTAAAGT TGCTTCTGAT GTGATTGTCT CAAACCGTAT GGCCAAAGAA CTGGCGGATG TTGCTGATAA GGTTTATACA CGCGATCTGT TTGGGAGTGA CTAA
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Protein sequence | MVLSNTGSKM KIAIAGTGYV GLSNAVLLAQ HHQVFAVDVI ADKVASINNR KSPIIDAEIE DFLTHRELNL TATLDKQLAY QDAEFVIIAT PTDYDPKTNY FNTSSVESVI QDVIGINPNA VMVIKSTVPV GFTAKVKQKY HCDNILFSPE FLREGRALYD NLHPSRIIVG ERSERAKVFA DLLVQGAIKK DIQVLFTDST EAEAVKLFSN TYLAMRVAYF NELDTYAETH GLDSRQIIEG VCLDPRIGDH YNNPSFGYGG YCLPKDTKQL RANYADVPNS IIGAIVESNT TRKDFIADSI LSRNPKVVGI YRLIMKSGSD NFRASSIQGI MKRLKAKGVE VIVYEPVLKE KEFFHSRVVT DLTAFKVASD VIVSNRMAKE LADVADKVYT RDLFGSD
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