Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2978 |
Symbol | |
ID | 5754769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3537757 |
End bp | 3538461 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641289302 |
Product | 3-oxoacid CoA-transferase, A subunit |
Protein accession | YP_001555404 |
Protein GI | 160876088 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAC TCAATAAAGT CGTCAGCAGC TATGAAGAAG CGTTAAACGG CTTATCAAAC GACATGACCA TTATGGTCGG CGGCTTTGGC CTGTGCGGCA TTCCCGAAGG CTTAATCAAT CAAATGGTTA AGATGGGCGT TAACGGCTTA ACTGCCATTT CAAACAACGC GGGTGTTGAC GACTTTGGCC TTGGCTTACT ATTAAAACAT CGCCAAATTG CCACTATGAT CGCCTCTTAC GTGGGCGAAA ACGCCACTTT CGAGCAACAA ATGCTCTCTG GCGAACTGAA CGTAATTTTA ACACCCCAAG GCACACTAGC GGAAAAAATC CGTGCAGGTG GCGCAGGCAT TCCGGCTTTT TTCACTGCAA CAGGTTACGG CACGCCAGTC GCTGATGGCA AGGAAACCCG CGAAATCAAA GGGCGCCATT ACGTGTTAGA AGAGTCGCTG ACCGCAGATT TTGCACTCGT GCGCGCATGG AAAGCCGATA CCATGGGTAA TTTAGTGTTC CGTAAAACCG CCGCCAACTT TAACCCTATG ATGGCGACCG CGGGCAAAAT CACTGTGGTT GAAGCCGAGT TTATTGTTGA GCCGGGCGAG CTAGACCCAG ATCATATCCA CACGCCGGGC ATCTATGTTG ACCGCGTTAT TCAAGGCACG TTCGAGAAAC GTATCGAGCA GCGCACGGTA AAAGCCGCGA AATAA
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Protein sequence | MAGLNKVVSS YEEALNGLSN DMTIMVGGFG LCGIPEGLIN QMVKMGVNGL TAISNNAGVD DFGLGLLLKH RQIATMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF FTATGYGTPV ADGKETREIK GRHYVLEESL TADFALVRAW KADTMGNLVF RKTAANFNPM MATAGKITVV EAEFIVEPGE LDPDHIHTPG IYVDRVIQGT FEKRIEQRTV KAAK
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