| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2962 |
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| Symbol | |
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| ID | 5754753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3517548 |
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| End bp | 3518486 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641289286 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001555388 |
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| Protein GI | 160876072 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.339496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.553858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG ATAATAAGGT GGCGTTAGTC ACTGGGGCGG GAGCAGGGCT AGGTCGAGCC
TATGCCATCA TGTTGGCTGA GCGGGGCGCG AAGGTGGTGC TCGTTGATCA GCCGTTATCG
TCATCCGAGT CTATTTCTAC CTATGGTGCT CAAACAATGC CGGCCAACTT AGCATTGATG
CAAACCTACT GCAGCATTAT TAAACTCGGC GGTGACTGTC TCTACTTTGT GCTTGATGTT
AGCCAGCGGG ATGAAGTAAA CCGCATGGTC GAAGAAGTGA TCCTACGTTG GCATCGCATT
GATATCTTGA TTAATAACGC GGGGATCTAC GGTGCTTGTC CGTTCGAGCA CATTAAGCTT
GAGCAGTGGC AACGGCAATT GGATGTCGAT CTCAATGGCA GTTTTTATCT GACGCAAGCC
GTTTGGCCCT ATATGCAACA ACAGGATTAT GGTCGGATCA TGATGACGAC GGGAGCTTCG
GCCTTGTTTG GTGATTTGCA TCAAGTCGGT TTCAGCGCGA GTAAGATGGC GCTGGTGGGC
ATGGTAAATT GCTTATCGAT AGAAGGAGAA ATTCATAATA TTCGTGTCAA TAGTTTATGC
CCGCAGGCCG TCACAGCGAT GACCGCCAAA CATTTAGCGA GTGCGATTCA GCCGTTATTT
TCCTTTGAGT CATTAACCGC CACAACGGCT TTTTTGGTGA GTGAACAGGC GCCCAATGGT
CAACACTTAC TCGCAGGTGC GGGCAGTATC AGCCATGGCA TGTTTGTCGA GTTTCAGCCG
ATGTATTTTA ATGAGGGGCT TTTTACGCCA GATAATCTCG CGCAGCAGTG GCCCCAGCTA
TACCAATCCT TTCCTGTTAC TTTGCACTCC AGTGGTGAGG ATAAAGTCTT GTCTTGGTCT
CAGTTAAGCG CGTTAGAACA CCATATTCAA ATTGACTGA
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| Protein sequence | MRFDNKVALV TGAGAGLGRA YAIMLAERGA KVVLVDQPLS SSESISTYGA QTMPANLALM
QTYCSIIKLG GDCLYFVLDV SQRDEVNRMV EEVILRWHRI DILINNAGIY GACPFEHIKL
EQWQRQLDVD LNGSFYLTQA VWPYMQQQDY GRIMMTTGAS ALFGDLHQVG FSASKMALVG
MVNCLSIEGE IHNIRVNSLC PQAVTAMTAK HLASAIQPLF SFESLTATTA FLVSEQAPNG
QHLLAGAGSI SHGMFVEFQP MYFNEGLFTP DNLAQQWPQL YQSFPVTLHS SGEDKVLSWS
QLSALEHHIQ ID
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