Gene Sbal195_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2953 
Symbol 
ID5754744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3505359 
End bp3506738 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content50% 
IMG OID641289277 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001555379 
Protein GI160876063 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0277282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGC CCAATTCCAT CCAAGATTAT TCTGTTCTCA TCATCGACGA TGAGCCACAC 
ATAGGCACAG TTCTCGTTCA GCTATTTGAA CTTGAGGGCA TTAAGGCGCT CGCCACCACA
GAGCCTAAAG GGATCGCTAA GCACCTGCAT AAAGATTGGG CGGGAATGGT GATATCAGAT
GTCAACATGC CGCAATTAGA TGGCATCAGC TTAATGCAAC AAATCCGCCT GCAGGACCCC
GACCTCCCCG TTGTGTTATT GACAGGGTTT GGGGATATCG CCATGGCAGT CAATGCCTTA
AAGCAAGGTG CCTACGACTT TCTCGAAAAG CCCTTTAATA ACGAGCATAT ACTCGATGTG
GTCAAGCGCG CCTTAGATAA ACGCAGCCTG ACCCTAGAGA ACCGTAAGCT TAAAAAGGAT
CTCGAAAGCC AGAGCGTACC GGGCCCTCGC ATTTTGGGTA ACAGCGTCGG CATCAACCGC
ATGCGCCACA TCATAGATCA AGTGATAGAT ACCCCCGCTG ACGTGTTAAT CGAGGGGGAA
ACAGGCACAG GTAAAGAGCT CGTCGCCCGC TATTTACACG ATCACAGCAG CCGCAGCCAA
GCCAACTTTG TCGCCATCAA CTGTGGTGCG ATCCCCGAAA ACTTAATTGA AAGTGAGCTC
TTTGGCGCCG AAGCAGGTGC CTTTACCGGC GTCGATAAGA TGCGCATTGG TAAGTTTGAA
TACGCCAACG GCGGCACATT ATTTTTAGAT GAAATTGAAA GTACACCACT GTCGCTGCAG
GTCAAACTTC TACGGGTACT TGAAGATCGT AAAGTTGAAC GCTTAGGGTC AAACAAAAGC
ATCAGCCTTG ATATACGGGT AATTGCCGCC ACTAAGGTGG ATTTAAAAAG CTTGTGTGAC
ACGGGGGAGT TTCGCCAAGA CTTGTTGTAT CGCTTAAATC TGGTGACTGT GCCTATCCCT
CCCCTGCGGG ATCGCCGTGA AGATATTCCT TTGCTGTTCC TGCACTTTGC CCGCGTCGCA
TCGGCACGCT ATCACAAAGC GCTTATCGCC TTAAATGCCG AGCAAAACGC CATTCTCACC
TCCCACGACT GGCCGGGCAA TGTGCGTGAG TTACGTAATC TCGCCGAACG CTTTGTACTG
CTGGGCGGAG AAGCCGCCTT TGCTGGCACT TTGGGCAATA CCCCAAGCCT GCACTCGAGT
ATGTCCTTAC TACAACGAGT CGAGTTTTTT GAAAGGGTAT TGATTGAAGA AGCGCTCAGC
CACAACAAGG GCAGCATTAA GCAGACGATG GAGCAACTGG AACTGCCCCG TAAAACCCTC
TACGACAAAA TGCGAAAATA CGATTTAGAC CGCAAGCAGT ACATTAACTC CGAGGACTAG
 
Protein sequence
MSVPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKALATT EPKGIAKHLH KDWAGMVISD 
VNMPQLDGIS LMQQIRLQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHILDV
VKRALDKRSL TLENRKLKKD LESQSVPGPR ILGNSVGINR MRHIIDQVID TPADVLIEGE
TGTGKELVAR YLHDHSSRSQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRIGKFE
YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS ISLDIRVIAA TKVDLKSLCD
TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT
SHDWPGNVRE LRNLAERFVL LGGEAAFAGT LGNTPSLHSS MSLLQRVEFF ERVLIEEALS
HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINSED