Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2953 |
Symbol | |
ID | 5754744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3505359 |
End bp | 3506738 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641289277 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001555379 |
Protein GI | 160876063 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0277282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGC CCAATTCCAT CCAAGATTAT TCTGTTCTCA TCATCGACGA TGAGCCACAC ATAGGCACAG TTCTCGTTCA GCTATTTGAA CTTGAGGGCA TTAAGGCGCT CGCCACCACA GAGCCTAAAG GGATCGCTAA GCACCTGCAT AAAGATTGGG CGGGAATGGT GATATCAGAT GTCAACATGC CGCAATTAGA TGGCATCAGC TTAATGCAAC AAATCCGCCT GCAGGACCCC GACCTCCCCG TTGTGTTATT GACAGGGTTT GGGGATATCG CCATGGCAGT CAATGCCTTA AAGCAAGGTG CCTACGACTT TCTCGAAAAG CCCTTTAATA ACGAGCATAT ACTCGATGTG GTCAAGCGCG CCTTAGATAA ACGCAGCCTG ACCCTAGAGA ACCGTAAGCT TAAAAAGGAT CTCGAAAGCC AGAGCGTACC GGGCCCTCGC ATTTTGGGTA ACAGCGTCGG CATCAACCGC ATGCGCCACA TCATAGATCA AGTGATAGAT ACCCCCGCTG ACGTGTTAAT CGAGGGGGAA ACAGGCACAG GTAAAGAGCT CGTCGCCCGC TATTTACACG ATCACAGCAG CCGCAGCCAA GCCAACTTTG TCGCCATCAA CTGTGGTGCG ATCCCCGAAA ACTTAATTGA AAGTGAGCTC TTTGGCGCCG AAGCAGGTGC CTTTACCGGC GTCGATAAGA TGCGCATTGG TAAGTTTGAA TACGCCAACG GCGGCACATT ATTTTTAGAT GAAATTGAAA GTACACCACT GTCGCTGCAG GTCAAACTTC TACGGGTACT TGAAGATCGT AAAGTTGAAC GCTTAGGGTC AAACAAAAGC ATCAGCCTTG ATATACGGGT AATTGCCGCC ACTAAGGTGG ATTTAAAAAG CTTGTGTGAC ACGGGGGAGT TTCGCCAAGA CTTGTTGTAT CGCTTAAATC TGGTGACTGT GCCTATCCCT CCCCTGCGGG ATCGCCGTGA AGATATTCCT TTGCTGTTCC TGCACTTTGC CCGCGTCGCA TCGGCACGCT ATCACAAAGC GCTTATCGCC TTAAATGCCG AGCAAAACGC CATTCTCACC TCCCACGACT GGCCGGGCAA TGTGCGTGAG TTACGTAATC TCGCCGAACG CTTTGTACTG CTGGGCGGAG AAGCCGCCTT TGCTGGCACT TTGGGCAATA CCCCAAGCCT GCACTCGAGT ATGTCCTTAC TACAACGAGT CGAGTTTTTT GAAAGGGTAT TGATTGAAGA AGCGCTCAGC CACAACAAGG GCAGCATTAA GCAGACGATG GAGCAACTGG AACTGCCCCG TAAAACCCTC TACGACAAAA TGCGAAAATA CGATTTAGAC CGCAAGCAGT ACATTAACTC CGAGGACTAG
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Protein sequence | MSVPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKALATT EPKGIAKHLH KDWAGMVISD VNMPQLDGIS LMQQIRLQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHILDV VKRALDKRSL TLENRKLKKD LESQSVPGPR ILGNSVGINR MRHIIDQVID TPADVLIEGE TGTGKELVAR YLHDHSSRSQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRIGKFE YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS ISLDIRVIAA TKVDLKSLCD TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT SHDWPGNVRE LRNLAERFVL LGGEAAFAGT LGNTPSLHSS MSLLQRVEFF ERVLIEEALS HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINSED
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