| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2937 |
|---|
| Symbol | |
|---|
| ID | 5754715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3482614 |
|---|
| End bp | 3483084 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289248 |
|---|
| Product | dual specificity protein phosphatase |
|---|
| Protein accession | YP_001555363 |
|---|
| Protein GI | 160876047 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.77035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.125353 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACT TATTCTGGTT AGTTGAAGGT AAAGTCGCAG GGCGCAGTGG TCCCAATAAA
GATCCTTGGG ATTTGCAAGC GCTTAAAGAG GCCGGTATTG GTGCCATCCT GTCGGTCAAT
GGGGGCGAAG GCTGCGAGCC TAGCACCTTT AAAAAGCTCG ATTTACGTTA CGAATGTATT
CCCTTTTCGC GCAATGTGCC GCCCCAAGAT GGGGATGTGG CGATTTGTGT CGCTCAATTG
CCCAAGGCAT TAGCTTTTAT TCAGCAGTGT GAAGCCGATG GATTACCTGT GGTGATCCAT
TGTCGCTCGG GTAAGGATCG CACTAGTCTC ATCATGGCTT ATTACTTGAT GGTCAATGGT
GCTGCGCCAT TACACGCTGT CAGCCAAGTT CGCAGTATTC GCGATATCGC CTTTACTGCC
GATGGTTGGG ATCAATTCGC CTTTGACGTT TTGTACGCAT TACAAGACTA A
|
|---|
| Protein sequence | MQHLFWLVEG KVAGRSGPNK DPWDLQALKE AGIGAILSVN GGEGCEPSTF KKLDLRYECI
PFSRNVPPQD GDVAICVAQL PKALAFIQQC EADGLPVVIH CRSGKDRTSL IMAYYLMVNG
AAPLHAVSQV RSIRDIAFTA DGWDQFAFDV LYALQD
|
|---|
| |