| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2882 |
|---|
| Symbol | tgt |
|---|
| ID | 5754660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3434291 |
|---|
| End bp | 3435415 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641289193 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001555308 |
|---|
| Protein GI | 160875992 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000363226 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGATAC TACCGACGGC CGTGCGCGTC GTGGTCGGTT GATTTTTGAC
CGTGGCACAG TAGAAACCCC AGCATTTATG CCTGTGGGAA CCTACGGCAC AGTTAAAGGT
ATGACGCCAG AAGAAGTACG TGCCACAGGC GCAGACATTC TGCTCGGTAA CACTTTCCAT
TTATGGTTGC GCCCAGGCGA AGAAATCATG CGCAAGCACG GTGACTTGCA TGATTTTATG
AACTGGCAGC GTCCGATTTT AACTGACTCG GGTGGTTTCC AAGTATTCAG TCTTGGCGAT
ATCCGTAAGA TCACTGAAGA AGGTGTGCAT TTCCGTTCGC CAATCAATGG CGAGAAAATC
TTCTTAGATC CTGAAAAATC AATGCAAATT CAAGATGCAT TGGGCAGTGA TGTAGTGATG
ATTTTTGACG AATGTACGCC ATATCCCGCA ACCGAAGACG AAGCGCGTAA GTCAATGCAG
ATGTCTCTGC GCTGGGCGAG ACGTTCACGT GATGAATTTG ACCGTTTAGA GAACCCTAAC
TCTCTGTTCG GTATTATTCA GGGCGGTGTG TATGAAGATT TACGCGACGA AAGCTTAAAA
GGCTTAGTCG ATATTGGTTT CGACGGTTAT GCCGTCGGTG GTTTGGCCGT AGGAGAGCCT
AAAGCGGATA TGCATCGCAT TCTTGAGCAT ATTTGCCCGC AAATTCCTGC AGACAAACCT
CGCTATCTGA TGGGGGTCGG TAAACCAGAA GATTTAGTTG AAGGTGTACG TCGTGGTGTT
GACATGTTTG ACTGTGTGAT GCCAACCCGT AATGCCCGCA ACGGTCATCT GTTTACGAGT
GAAGGTGTGA TCAAAATACG CAATGCGCGT CATAGAGATG ACACGTCACC ACTTGATACT
AAGTGTGATT GTTATACCTG TAAAAATTAT TCACGGGCGT ACCTTTACCA CTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACGGGTACAT TAGACGCCTT TGTGGCGGAC
TTCTATACCA GTCAAGGTCG CGAAGTACCA GAGTTAGTCG ATTGA
|
|---|
| Protein sequence | MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWARRSR DEFDRLENPN
SLFGIIQGGV YEDLRDESLK GLVDIGFDGY AVGGLAVGEP KADMHRILEH ICPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDT
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVAD
FYTSQGREVP ELVD
|
|---|
| |